Detail Information

Basic Information:


  VIRBase ID:  

VHID00549861

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B7-5p:           BUD31:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B7-5p BUD31
miRBase
Accession/Entrez ID
MIMAT0031766 8896
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - Cwc14//EDG-2//EDG2//fSAP17//G10//YCR063W

RNA Editing:


Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED BUD31
chr7:99009522(+) T-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BUD31
chr7:99006302-99006303(+) m6A 5'UTR       25456834//24981863//27371828
chr7:99006308-99006309(+) m6A 5'UTR       25456834//24981863//27371828
chr7:99006337-99006338(+) m6A 5'UTR       25456834//24981863//27371828
chr7:99006500-99006501(+) m6A 5'UTR       24981863
chr7:99006550-99006551(+) m6A 5'UTR       24981863
chr7:99006679-99006680(+) m6A 5'UTR//intron       24981863//27773535
chr7:99006759-99006760(+) m6A 5'UTR//exon//intron       -
chr7:99006764-99006765(+) Gm 5'UTR//exon//intron       -
chr7:99007661-99007662(+) m6A 5'UTR//exon       26404942
chr7:99007666-99007667(+) m6A 5'UTR//exon       26404942
chr7:99007717-99007718(+) m6A 5'UTR//exon       27773535
chr7:99015455-99015456(+) m6A exon//intron       27773535
chr7:99015726-99015727(+) m6A exon//intron       24284625//25456834//27371828//27773536//22575960//22608085
chr7:99017085-99017086(+) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr7:99017092-99017093(+) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22575960//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate BUD31
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B7-5p
Interactor2: BUD31

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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