Basic Information:

  VIRBase ID:  

VHID00548156

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-3p:  MIMAT0031765          RGPD8:  NM_001164463     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B3RC-3p	RGPD8
miRBase Accession/Entrez ID	MIMAT0031765	727851
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	RanBP2alpha//RANBP2L1//RGP8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RGPD8	chr2:113168497(-) A-I      intronic chr2:113166387(-) A-I      intronic chr2:113166405(-) A-I      intronic chr2:113171971(-) A-I      intronic chr2:113167783(-) A-I      intronic chr2:113167706(-) A-I      intronic chr2:113167675(-) A-I      intronic chr2:113167671(-) A-I      intronic chr2:113166456(-) A-I      intronic chr2:113166442(-) A-I      intronic chr2:113166428(-) A-I      intronic chr2:113166419(-) A-I      intronic chr2:113166413(-) A-I      intronic chr2:113168190(-) A-I      intronic chr2:113168189(-) A-I      intronic chr2:113167620(-) A-I      intronic chr2:113172214(-) A-I      intronic chr2:113172213(-) A-I      intronic chr2:113171997(-) A-I      intronic chr2:113171992(-) A-I      intronic chr2:113167635(-) A-I      intronic chr2:113168308(-) A-I      intronic chr2:113166452(-) A-I      intronic chr2:113167367(-) A-I      intronic chr2:113167821(-) A-I      intronic chr2:113166453(-) A-I      intronic chr2:113168352(-) A-I      intronic chr2:113168165(-) A-I      intronic chr2:113187585(-) A-I      intronic chr2:113127972(-) A-I      intronic chr2:113171808(-) A-I      intronic chr2:113166251(-) A-I      intronic chr2:113168446(-) A-I      intronic chr2:113168292(-) A-I      intronic chr2:113189352(-) A-I      intronic chr2:113168303(-) A-I      intronic chr2:113168540(-) A-I      intronic chr2:113166255(-) A-I      intronic chr2:113145017(-) A-I      intronic chr2:113172840(-) A-I      intronic chr2:113189420(-) A-I      intronic chr2:113167863(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RGPD8	chr2:113146011-113146012(-) m6A CDS       27773535 chr2:113146799-113146800(-) m6A CDS       27773535//22608085 chr2:113146813-113146814(-) m6A CDS       27773535//22608085 chr2:113146826-113146827(-) m6A CDS       24981863//27773535//22608085 chr2:113146884-113146885(-) m6A CDS       24981863//27773535//22608085 chr2:113146905-113146906(-) m6A CDS       24981863//27773535//22608085 chr2:113146921-113146922(-) m6A CDS       24981863//27773535//22608085 chr2:113191866-113191867(-) m6A 5'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RGPD8	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B3RC-3p
Interactor2: RGPD8

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg