Basic Information:

  VIRBase ID:  

VHID00547552

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-3p:  MIMAT0031765          EARS2:  NM_001308211     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B3RC-3p	EARS2
miRBase Accession/Entrez ID	MIMAT0031765	124454
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	COXPD12//gluRS//MSE1//mtGlnRS

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EARS2	chr16:23540074(-) A-I      intronic chr16:23540098(-) A-I      intronic chr16:23540103(-) A-I      intronic chr16:23548999(-) A-I      intronic chr16:23549004(-) A-I      intronic chr16:23548970(-) A-I      intronic chr16:23567107(-) A-I      intronic chr16:23536182(-) A-I      intronic chr16:23558954(-) A-I      intronic chr16:23559362(-) A-I      intronic chr16:23562734(-) A-I      intronic chr16:23562740(-) A-I      intronic chr16:23562744(-) A-I      intronic chr16:23562809(-) A-I      intronic chr16:23562813(-) A-I      intronic chr16:23562815(-) A-I      intronic chr16:23562854(-) A-I      intronic chr16:23562978(-) A-I      intronic chr16:23562996(-) A-I      intronic chr16:23563130(-) A-I      intronic chr16:23563134(-) A-I      intronic chr16:23565131(-) A-I      intronic chr16:23566624(-) A-I      intronic chr16:23566641(-) A-I      intronic chr16:23566708(-) A-I      intronic chr16:23566714(-) A-I      intronic chr16:23537545(-) A-I      intronic chr16:23536053(-) A-I      intronic chr16:23554233(-) A-I      intronic chr16:23537099(-) A-I      intronic chr16:23537137(-) A-I      intronic chr16:23537510(-) A-I      intronic chr16:23537549(-) A-I      intronic chr16:23557941(-) A-I      intronic chr16:23553856(-) A-I      intronic chr16:23553777(-) A-I      intronic chr16:23553082(-) A-I      intronic chr16:23550297(-) A-I      intronic chr16:23550121(-) A-I      intronic chr16:23549058(-) A-I      intronic chr16:23548991(-) A-I      intronic chr16:23548986(-) A-I      intronic chr16:23548966(-) A-I      intronic chr16:23548616(-) A-I      intronic chr16:23548601(-) A-I      intronic chr16:23548110(-) A-I      intronic chr16:23548109(-) A-I      intronic chr16:23548101(-) A-I      intronic chr16:23544579(-) A-I      intronic chr16:23542861(-) A-I      intronic chr16:23542783(-) A-I      intronic chr16:23542720(-) A-I      intronic chr16:23542714(-) A-I      intronic chr16:23542710(-) A-I      intronic chr16:23542311(-) A-I      intronic chr16:23541984(-) A-I      intronic chr16:23537558(-) A-I      intronic chr16:23537550(-) A-I      intronic chr16:23540127(-) A-I      intronic chr16:23537572(-) A-I      intronic chr16:23537629(-) A-I      intronic chr16:23537684(-) A-I      intronic chr16:23538444(-) A-I      intronic chr16:23538475(-) A-I      intronic chr16:23539003(-) A-I      intronic chr16:23539044(-) A-I      intronic chr16:23539049(-) A-I      intronic chr16:23539051(-) A-I      intronic chr16:23539058(-) A-I      intronic chr16:23539069(-) A-I      intronic chr16:23540039(-) A-I      intronic chr16:23540078(-) A-I      intronic chr16:23540100(-) A-I      intronic chr16:23545315(-) A-I      intronic chr16:23540109(-) A-I      intronic chr16:23540110(-) A-I      intronic chr16:23541477(-) A-I      intronic chr16:23541871(-) A-I      intronic chr16:23536193(-) A-I      intronic chr16:23552442(-) A-I      intronic chr16:23549932(-) A-I      intronic chr16:23541646(-) A-I      intronic chr16:23563120(-) A-I      intronic chr16:23537665(-) A-I      intronic chr16:23537100(-) A-I      intronic chr16:23566727(-) A-I      intronic chr16:23542334(-) A-I      intronic chr16:23560923(-) A-I      intronic chr16:23562733(-) A-I      intronic chr16:23562031(-) A-I      intronic chr16:23539146(-) A-I      intronic chr16:23552443(-) A-I      intronic chr16:23555007(-) A-I      intronic chr16:23537207(-) A-I      intronic chr16:23553152(-) A-I      intronic chr16:23553153(-) A-I      intronic chr16:23559433(-) A-I      intronic chr16:23554617(-) A-I      intronic chr16:23537636(-) A-I      intronic chr16:23538566(-) A-I      intronic chr16:23537628(-) A-I      intronic chr16:23544202(-) A-I      intronic chr16:23561066(-) A-I      intronic chr16:23565540(-) A-I      intronic chr16:23553801(-) A-I      intronic chr16:23544210(-) A-I      intronic chr16:23538448(-) A-I      intronic chr16:23567140(-) A-I      intronic chr16:23543170(-) A-I      intronic chr16:23537571(-) A-I      intronic chr16:23554231(-) A-I      intronic chr16:23565093(-) A-I      intronic chr16:23542310(-) A-I      intronic chr16:23537530(-) A-I      intronic chr16:23567166(-) A-I      intronic chr16:23549921(-) A-I      intronic chr16:23537726(-) A-I      intronic chr16:23567906(-) A-I      intronic chr16:23553533(-) A-I      intronic chr16:23552053(-) A-I      intronic chr16:23553815(-) A-I      intronic chr16:23544278(-) A-I      intronic chr16:23542121(-) A-I      intronic chr16:23566660(-) A-I      intronic chr16:23549217(-) A-I      intronic chr16:23553863(-) A-I      intronic chr16:23565613(-) A-I      intronic chr16:23565469(-) A-I      intronic chr16:23562030(-) A-I      intronic chr16:23537634(-) A-I      intronic chr16:23566762(-) A-I      intronic chr16:23553908(-) A-I      intronic chr16:23548100(-) A-I      intronic chr16:23542005(-) A-I      intronic chr16:23561963(-) A-I      intronic chr16:23544291(-) A-I      intronic chr16:23549050(-) A-I      intronic chr16:23554834(-) A-I      intronic chr16:23549990(-) A-I      intronic chr16:23565590(-) A-I      intronic chr16:23561564(-) A-I      intronic chr16:23542816(-) A-I      intronic chr16:23549243(-) A-I      intronic chr16:23543234(-) A-I      intronic chr16:23552392(-) A-I      intronic chr16:23567813(-) A-I      intronic chr16:23542421(-) A-I      intronic chr16:23542097(-) A-I      intronic chr16:23561499(-) A-I      intronic chr16:23543298(-) A-I      intronic chr16:23561027(-) A-I      intronic chr16:23542075(-) A-I      intronic chr16:23548996(-) A-I      intronic chr16:23552393(-) A-I      intronic chr16:23551426(-) A-I      intronic chr16:23549606(-) A-I      intronic chr16:23563047(-) A-I      intronic chr16:23544364(-) A-I      intronic chr16:23545133(-) A-I      intronic chr16:23541539(-) A-I      intronic chr16:23548977(-) A-I      intronic chr16:23567170(-) A-I      intronic chr16:23567741(-) A-I      intronic chr16:23562771(-) A-I      intronic chr16:23550436(-) A-I      intronic chr16:23564955(-) A-I      intronic chr16:23540077(-) A-I      intronic chr16:23557093(-) A-I      intronic chr16:23567149(-) A-I      intronic chr16:23549032(-) A-I      intronic chr16:23565614(-) A-I      intronic chr16:23559059(-) A-I      intronic chr16:23564301(-) A-I      intronic chr16:23550170(-) A-I      intronic chr16:23566763(-) A-I      intronic chr16:23542008(-) A-I      intronic chr16:23544323(-) A-I      intronic chr16:23538486(-) A-I      intronic chr16:23566684(-) A-I      intronic chr16:23549048(-) A-I      intronic chr16:23554573(-) A-I      intronic chr16:23563051(-) A-I      intronic chr16:23553572(-) A-I      intronic chr16:23539147(-) A-I      intronic chr16:23565095(-) A-I      intronic chr16:23542368(-) A-I      intronic chr16:23566664(-) A-I      intronic chr16:23541650(-) A-I      intronic chr16:23550371(-) A-I      intronic chr16:23554971(-) A-I      intronic chr16:23541643(-) A-I      intronic chr16:23562853(-) A-I      intronic chr16:23542110(-) A-I      intronic chr16:23550174(-) A-I      intronic chr16:23553107(-) A-I      intronic chr16:23542054(-) A-I      intronic chr16:23542080(-) A-I      intronic chr16:23542022(-) A-I      intronic chr16:23543171(-) A-I      intronic chr16:23550463(-) A-I      intronic chr16:23561657(-) A-I      intronic chr16:23541971(-) A-I      intronic chr16:23541642(-) A-I      intronic chr16:23549038(-) A-I      intronic chr16:23544220(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	EARS2	chr16:23541642(-) A-I intron -    22327324 chr16:23541646(-) A-I intron -    22327324 chr16:23541642(-) A-G intron -    22484847 chr16:23541643(-) A-G intron -    22484847 chr16:23541646(-) A-G intron -    22484847 chr16:23542310(-) A-G intron -    22484847 chr16:23543298(-) A-G intron -    22484847 chr16:23544202(-) A-G intron -    22484847 chr16:23550174(-) A-G intron -    22484847 chr16:23565469(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EARS2	chr16:23534007-23534008(-) m6A 3'UTR//exon       24981863 chr16:23534076-23534077(-) m6A 3'UTR//exon       24284625//24981863//22608085 chr16:23534086-23534087(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr16:23534117-23534118(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr16:23534130-23534131(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr16:23534544-23534545(-) m6A 3'UTR//exon//intron       24284625 chr16:23534709-23534710(-) m6A 3'UTR//exon//intron       24284625//27773535 chr16:23534716-23534717(-) m6A 3'UTR//exon//intron       24284625//27773535//22608085 chr16:23534729-23534730(-) m6A 3'UTR//exon//intron       24284625//27773535//22608085 chr16:23534793-23534794(-) m6A 3'UTR//exon//intron       24284625//24981863//27773535//22575960//22608085 chr16:23534877-23534878(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:23534884-23534885(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:23534889-23534890(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:23534929-23534930(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:23534960-23534961(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:23534993-23534994(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:23535110-23535111(-) m6A 3'UTR//exon//intron       24284625//24981863//27773535//22608085 chr16:23535121-23535122(-) m6A 3'UTR//exon//intron       24284625//24981863//27773535//22608085 chr16:23535214-23535215(-) m6A 3'UTR//exon//intron       24284625//27773535 chr16:23535314-23535315(-) m6A 3'UTR//exon       24284625//27773535 chr16:23535328-23535329(-) m6A 3'UTR//exon       24284625//27773535//22608085 chr16:23535386-23535387(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:23535475-23535476(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:23535568-23535569(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:23535581-23535582(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:23535624-23535625(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:23535637-23535638(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr16:23535653-23535654(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:23535736-23535737(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:23535769-23535770(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr16:23536353-23536354(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr16:23536418-23536419(-) m6A 3'UTR//intron       27773535 chr16:23536631-23536632(-) Am CDS//exon       - chr16:23541217-23541218(-) m6A CDS//exon       27371828 chr16:23544068-23544069(-) m6A CDS//exon       - chr16:23544082-23544083(-) m6A CDS//exon       - chr16:23546240-23546241(-) m6A CDS//exon       - chr16:23546519-23546520(-) m6A CDS//exon       25456834//22608085 chr16:23546567-23546568(-) m6A CDS//exon       25456834//24981863//27371828//22608085 chr16:23546621-23546622(-) m6A CDS//exon       25456834//24981863//27371828//22608085 chr16:23546660-23546661(-) m6A 3'UTR//CDS//exon       25456834//24981863//27371828//22608085 chr16:23568643-23568644(-) m6A CDS//exon       24981863 chr16:23568932-23568933(-) m6A 5'UTR       24981863 chr16:23568954-23568955(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EARS2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B3RC-3p
Interactor2: EARS2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg