Detail Information

Basic Information:


  VIRBase ID:  

VHID00547291

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-3p:           BTBD10:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B3RC-3p BTBD10
miRBase
Accession/Entrez ID		 MIMAT0031765 84280
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - GMRP-1//GMRP1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BTBD10
chr11:13437421(-) A-I      intronic
chr11:13437461(-) A-I      intronic
chr11:13437462(-) A-I      intronic
chr11:13476177(-) A-I      intronic
chr11:13437792(-) A-I      intronic
chr11:13465237(-) A-I      intronic
chr11:13437854(-) A-I      intronic
chr11:13438319(-) A-I      intronic
chr11:13448762(-) A-I      intronic
chr11:13438409(-) A-I      intronic
chr11:13464744(-) A-I      intronic
chr11:13464794(-) A-I      intronic
chr11:13465204(-) A-I      intronic
chr11:13465220(-) A-I      intronic
chr11:13465236(-) A-I      intronic
chr11:13465263(-) A-I      intronic
chr11:13468918(-) A-I      intronic
chr11:13475375(-) A-I      intronic
chr11:13464739(-) A-I      intronic
chr11:13475379(-) A-I      intronic
chr11:13475499(-) A-I      intronic
chr11:13475530(-) A-I      intronic
chr11:13465227(-) A-I      intronic
chr11:13475537(-) A-I      intronic
chr11:13476595(-) A-I      intronic
chr11:13476637(-) A-I      intronic
chr11:13476638(-) A-I      intronic
chr11:13476676(-) A-I      intronic
chr11:13476687(-) A-I      intronic
chr11:13464718(-) A-I      intronic
chr11:13476711(-) A-I      intronic
chr11:13476732(-) A-I      intronic
chr11:13476735(-) A-I      intronic
chr11:13438314(-) A-I      intronic
chr11:13465209(-) A-I      intronic
chr11:13433475(-) A-I      intronic
chr11:13436721(-) A-I      intronic
chr11:13413409(-) A-I      intronic
chr11:13464701(-) A-I      intronic
chr11:13413434(-) A-I      intronic
chr11:13413439(-) A-I      intronic
chr11:13433571(-) A-I      intronic
chr11:13465268(-) A-I      intronic
chr11:13433585(-) A-I      intronic
chr11:13433657(-) A-I      intronic
chr11:13433757(-) A-I      intronic
chr11:13433891(-) A-I      intronic
chr11:13433917(-) A-I      intronic
chr11:13433918(-) A-I      intronic
chr11:13411063(-) A-I      intronic
chr11:13411072(-) A-I      intronic
chr11:13436013(-) A-I      intronic
chr11:13436744(-) A-I      intronic
chr11:13437337(-) A-I      intronic
chr11:13437345(-) A-I      intronic
chr11:13413408(-) A-I      intronic
chr11:13437406(-) A-I      intronic
chr11:13457207(-) A-I      intronic
chr11:13437430(-) A-I      intronic
chr11:13437454(-) A-I      intronic
chr11:13433953(-) A-I      intronic
chr11:13437357(-) A-I      intronic
chr11:13411157(-) A-I      intronic
chr11:13464685(-) A-I      intronic
chr11:13475477(-) A-I      intronic
chr11:13412073(-) A-I      intronic
chr11:13478659(-) A-I      intronic
chr11:13436767(-) A-I      intronic
chr11:13464738(-) A-I      intronic
chr11:13433507(-) A-I      intronic
chr11:13465269(-) A-I      intronic
chr11:13437475(-) A-I      intronic
chr11:13437343(-) A-I      intronic
chr11:13433948(-) A-I      intronic
chr11:13438407(-) A-I      intronic
chr11:13412059(-) A-I      intronic
chr11:13433878(-) A-I      intronic
chr11:13438351(-) A-I      intronic
chr11:13448763(-) A-I      intronic
chr11:13434300(-) A-I      intronic
chr11:13475523(-) A-I      intronic
chr11:13411048(-) A-I      intronic
chr11:13433888(-) A-I      intronic
chr11:13433517(-) A-I      intronic
chr11:13433838(-) A-I      intronic
chr11:13411060(-) A-I      intronic
chr11:13433837(-) A-I      intronic
chr11:13478457(-) A-I      intronic
chr11:13412157(-) A-I      intronic
chr11:13436753(-) A-I      intronic
chr11:13433476(-) A-I      intronic
chr11:13437736(-) A-I      intronic
chr11:13437422(-) A-I      intronic
chr11:13457148(-) A-I      intronic
chr11:13434209(-) A-I      intronic
chr11:13436324(-) A-I      intronic
chr11:13436757(-) A-I      intronic
chr11:13434666(-) A-I      intronic
chr11:13437733(-) A-I      intronic
chr11:13433809(-) A-I      intronic
chr11:13475444(-) A-I      intronic
chr11:13438336(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED BTBD10
chr11:13437357(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BTBD10
chr11:13410045-13410046(-) m6A 3'UTR       24209618//24981863//26404942//22608085
chr11:13410234-13410235(-) m6A 3'UTR       -
chr11:13410359-13410360(-) m6A 3'UTR       24284625//24981863//22608085
chr11:13410443-13410444(-) Y 3'UTR//CDS       26075521
chr11:13410492-13410493(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr11:13410504-13410505(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085
chr11:13410558-13410559(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085
chr11:13410611-13410612(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085
chr11:13424779-13424780(-) m6A 3'UTR//CDS       24981863//27773535
chr11:13426905-13426906(-) m6A exon//intron       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate BTBD10
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B3RC-3p
Interactor2: BTBD10

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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