Basic Information:

  VIRBase ID:  

VHID00546924

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-3p:  MIMAT0031765          POGK:  NM_017542     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B3RC-3p	POGK
miRBase Accession/Entrez ID	MIMAT0031765	57645
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BASS2//KRBOX2//LST003

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	POGK	chr1:166825342(+) A-I      3'UTR chr1:166825294(+) A-I      3'UTR chr1:166825465(+) A-I      3'UTR chr1:166825333(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	POGK	chr1:166808693-166808694(+) m6A 5'UTR       24981863 chr1:166809643-166809644(+) m6A 5'UTR//intron       - chr1:166809655-166809656(+) m6A 5'UTR//intron       - chr1:166809660-166809661(+) m6A 5'UTR//intron       - chr1:166810248-166810249(+) m1A CDS       26863196 chr1:166810267-166810268(+) m6A CDS       24981863 chr1:166810287-166810288(+) m6A CDS       - chr1:166816751-166816752(+) m6A CDS       24284625 chr1:166818204-166818205(+) m6A CDS       24284625 chr1:166818213-166818214(+) m6A CDS       24284625//22575960 chr1:166818513-166818514(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166818603-166818604(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166818648-166818649(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166818705-166818706(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166818816-166818817(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166818829-166818830(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166818983-166818984(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166819000-166819001(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166819073-166819074(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr1:166819146-166819147(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166819158-166819159(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166819187-166819188(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166819263-166819264(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166819281-166819282(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166819404-166819405(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166819600-166819601(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr1:166819716-166819717(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr1:166819809-166819810(+) m6A 3'UTR//intron       24981863 chr1:166819836-166819837(+) m6A 3'UTR//intron       24284625//24981863 chr1:166819938-166819939(+) m6A 3'UTR//intron       24284625//24981863//22575960 chr1:166819950-166819951(+) m6A 3'UTR//intron       24284625//24981863//22575960 chr1:166820009-166820010(+) m6A 3'UTR//intron       24284625//24981863 chr1:166820086-166820087(+) m6A 3'UTR//intron       24284625//24981863 chr1:166820115-166820116(+) m6A 3'UTR//intron       24284625//24981863 chr1:166820724-166820725(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:166820743-166820744(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:166820784-166820785(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:166820824-166820825(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:166820897-166820898(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:166820910-166820911(+) m6A 3'UTR//intron       24981863//22608085 chr1:166821829-166821830(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22608085 chr1:166821841-166821842(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166821908-166821909(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166821936-166821937(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166821951-166821952(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:166821977-166821978(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr1:166822027-166822028(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr1:166822046-166822047(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr1:166822063-166822064(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr1:166822119-166822120(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr1:166822137-166822138(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr1:166822162-166822163(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr1:166822187-166822188(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr1:166822230-166822231(+) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr1:166822278-166822279(+) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr1:166822301-166822302(+) m6A 3'UTR       24284625//24981863//26404942//22575960//22608085 chr1:166823413-166823414(+) Y 3'UTR       25219674//26075521 chr1:166823498-166823499(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr1:166823672-166823673(+) m6A 3'UTR       24981863//27773535//22608085 chr1:166823689-166823690(+) m6A 3'UTR       24981863//27773535//22608085 chr1:166823704-166823705(+) m6A 3'UTR       24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	POGK	Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B3RC-3p
Interactor2: POGK

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg