Basic Information:

  VIRBase ID:  

VHID00545483

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-3p:  MIMAT0031765          TCF19:  NM_007109     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B3RC-3p	TCF19
miRBase Accession/Entrez ID	MIMAT0031765	6941
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SC1//TCF-19

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TCF19	chr6:31126390-31126391(+) m6A 5'UTR       24284625 chr6:31126485-31126486(+) m6A 5'UTR       24284625//22575960 chr6:31126784-31126785(+) m1A 5'UTR//intron       26863196 chr6:31126852-31126853(+) m6A 5'UTR//intron       24284625//24981863 chr6:31127008-31127009(+) m6A 5'UTR       24284625//24209618//24981863//22575960//22608085 chr6:31127117-31127118(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31127149-31127150(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31127161-31127162(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31127422-31127423(+) m6A CDS       24284625//24209618//25456834//22575960 chr6:31127469-31127470(+) m6A CDS       24284625//24209618//25456834 chr6:31129283-31129284(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085 chr6:31129318-31129319(+) m6A CDS//exon       24284625//24981863//22575960//22608085 chr6:31129373-31129374(+) m6A CDS//intron       24284625//24981863//22608085 chr6:31129514-31129515(+) m6A CDS//intron       24284625//24981863//22608085 chr6:31129578-31129579(+) m6A CDS//exon       24284625 chr6:31129621-31129622(+) m6A CDS//exon       24284625 chr6:31129683-31129684(+) m6A CDS//exon       24284625 chr6:31129712-31129713(+) m6A CDS//exon       24284625 chr6:31129746-31129747(+) m6A CDS//exon       24284625 chr6:31129757-31129758(+) m6A CDS//exon       24284625 chr6:31130365-31130366(+) m6A CDS//exon//intron       24284625//24209618//24981863//22575960//22608085 chr6:31130488-31130489(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31130518-31130519(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31130538-31130539(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31130632-31130633(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31130654-31130655(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31130669-31130670(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31130771-31130772(+) m6A 3'UTR//exon//intron       24284625//24209618//24981863//22608085 chr6:31130892-31130893(+) m6A 3'UTR//intron       24284625 chr6:31130912-31130913(+) m6A 3'UTR//intron       24284625 chr6:31130999-31131000(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr6:31131095-31131096(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr6:31131138-31131139(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr6:31131558-31131559(+) m6A 3'UTR//intron       24981863 chr6:31131637-31131638(+) m6A 3'UTR//intron       24981863//22608085 chr6:31131648-31131649(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr6:31131672-31131673(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr6:31131715-31131716(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr6:31131728-31131729(+) m6A 3'UTR//intron       24284625//22608085 chr6:31131737-31131738(+) m6A 3'UTR//intron       24284625//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TCF19	Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B3RC-3p
Interactor2: TCF19

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg