Basic Information:

  VIRBase ID:  

VHID00544812

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-3p:  MIMAT0031765          EIF5:  NM_183004     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B3RC-3p	EIF5
miRBase Accession/Entrez ID	MIMAT0031765	1983
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EIF-5//EIF-5A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EIF5	chr14:103803797(+) A-I      intronic chr14:103802797(+) A-I      intronic chr14:103806257(+) A-I      intronic chr14:103803760(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EIF5	chr14:103800463-103800464(+) m6A 5'UTR//intron       25456834//24981863 chr14:103800586-103800587(+) m6A 5'UTR//exon//intron       25456834//24981863//27371828//27773536 chr14:103800755-103800756(+) m6A 5'UTR//exon//intron       25456834//24981863//27371828//27773536//22575960 chr14:103800773-103800774(+) m6A 5'UTR//exon//intron       24981863//27371828//22575960 chr14:103800848-103800849(+) m6A 5'UTR//exon//intron       22575960 chr14:103800854-103800855(+) m6A 5'UTR//exon//intron       22575960 chr14:103803051-103803052(+) m6A CDS//exon       27773535 chr14:103803118-103803119(+) m6A CDS//exon       27773535 chr14:103803177-103803178(+) m6A CDS//exon       27773535 chr14:103803290-103803291(+) m6A exon//intron       27773535 chr14:103803297-103803298(+) m6A exon//intron       27773535 chr14:103803473-103803474(+) m6A CDS//exon       27773535 chr14:103803532-103803533(+) m6A CDS//exon       24981863//27773535 chr14:103803555-103803556(+) m6A CDS//exon       24981863//27773535 chr14:103803582-103803583(+) m6A exon//intron       24981863//27773535 chr14:103803620-103803621(+) m6A exon//intron       24981863//27773535 chr14:103803660-103803661(+) m6A exon//intron       24981863//27773535 chr14:103804233-103804234(+) Cm intron       - chr14:103804708-103804709(+) m6A CDS//exon       24981863//27773535//22608085 chr14:103804723-103804724(+) m6A CDS//exon       24981863//27773535//22608085 chr14:103804755-103804756(+) m6A CDS//exon       24981863//27773535//22608085 chr14:103805188-103805189(+) m6A CDS//exon       27773535 chr14:103805570-103805571(+) m6A CDS//exon       27773535 chr14:103805636-103805637(+) m6A CDS//exon       27773535 chr14:103806099-103806100(+) m6A CDS//exon       27773535 chr14:103806742-103806743(+) m6A exon//intron       27773535 chr14:103806789-103806790(+) m6A CDS//exon       24981863//26404942//27773535 chr14:103806819-103806820(+) m6A CDS//exon       24981863//26404942//27773535 chr14:103806890-103806891(+) m6A CDS//exon       26404942//27773535//22575960 chr14:103807338-103807339(+) m6A CDS//exon       26404942//27773535//22575960 chr14:103807351-103807352(+) m6A CDS//exon       26404942//27773535//22575960 chr14:103808560-103808561(+) m6A 3'UTR//exon       - chr14:103808770-103808771(+) m6A 3'UTR       27773535 chr14:103809298-103809299(+) m6A 3'UTR       27773535 chr14:103809318-103809319(+) m6A 3'UTR       27773535 chr14:103809339-103809340(+) m6A 3'UTR       27773535 chr14:103809362-103809363(+) m6A 3'UTR       27773535 chr14:103809395-103809396(+) m6A 3'UTR       27773535 chr14:103811178-103811179(+) m6A 3'UTR       24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EIF5	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B3RC-3p
Interactor2: EIF5

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg