Detail Information

Basic Information:


  VIRBase ID:  

VHID00544096

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-5p:           NANP:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B3RC-5p NANP
miRBase
Accession/Entrez ID
MIMAT0031764 140838
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - C20orf147//dJ694B14.3//HDHD4

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NANP
chr20:25597612(-) A-I      intronic
chr20:25597579(-) A-I      intronic
chr20:25595499(-) A-I      3'UTR
chr20:25600037(-) A-I      intronic
chr20:25595496(-) A-I      3'UTR
chr20:25595420(-) A-I      3'UTR
chr20:25598428(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NANP
chr20:25596585-25596586(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr20:25596730-25596731(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr20:25596759-25596760(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr20:25596815-25596816(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr20:25596898-25596899(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr20:25596906-25596907(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr20:25596947-25596948(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr20:25597060-25597061(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr20:25597090-25597091(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr20:25597142-25597143(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr20:25597208-25597209(-) m6A CDS       24209618//24981863//27773535//22608085
chr20:25604543-25604544(-) m6A CDS       24209618//24981863//27371828//22608085
chr20:25604721-25604722(-) m6A 5'UTR       24981863
chr20:25604777-25604778(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NANP
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B3RC-5p
Interactor2: NANP

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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