Basic Information:

  VIRBase ID:  

VHID00544063

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-5p:  MIMAT0031764          STARD4:  NR_131752     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B3RC-5p	STARD4
miRBase Accession/Entrez ID	MIMAT0031764	134429
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	STARD4	chr5:110845497(-) A-I      intronic chr5:110845510(-) A-I      intronic chr5:110845489(-) A-I      intronic chr5:110847213(-) A-I      intronic chr5:110847221(-) A-I      intronic chr5:110845516(-) A-I      intronic chr5:110845519(-) A-I      intronic chr5:110845480(-) A-I      intronic chr5:110847243(-) A-I      intronic chr5:110845498(-) A-I      intronic chr5:110845523(-) A-I      intronic chr5:110847179(-) A-I      intronic chr5:110845491(-) A-I      intronic chr5:110847200(-) A-I      intronic chr5:110847204(-) A-I      intronic chr5:110839322(-) A-I      intronic chr5:110835223(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	STARD4	chr5:110847251(-) A-G intron -    22484847 chr5:110835388(-) T-A exon 3'UTR    22484847 chr5:110838402(-) T-C intron -    22484847 chr5:110845462(-) A-G intron -    22484847 chr5:110845527(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	STARD4	chr5:110834844-110834845(-) m6A 3'UTR       24981863 chr5:110834875-110834876(-) m6A 3'UTR       24981863 chr5:110835020-110835021(-) m6A 3'UTR       24284625 chr5:110835564-110835565(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr5:110835678-110835679(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085 chr5:110835707-110835708(-) m6A 3'UTR//CDS//exon       24284625//24981863//27371828//22608085 chr5:110835716-110835717(-) m6A 3'UTR//CDS//exon       24284625//24981863//27371828//22608085 chr5:110835775-110835776(-) m6A 3'UTR//CDS//exon       24284625//24981863//27371828//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	STARD4	Cytosol K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B3RC-5p
Interactor2: STARD4

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg