Detail Information

Basic Information:


  VIRBase ID:  

VHID00543118

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-5p:           MBIP:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B3RC-5p MBIP
miRBase
Accession/Entrez ID
MIMAT0031764 51562
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MBIP
chr14:36775682(-) A-I      intronic
chr14:36775601(-) A-I      intronic
chr14:36780454(-) A-I      intronic
chr14:36779114(-) A-I      intronic
chr14:36779117(-) A-I      intronic
chr14:36771509(-) A-I      intronic
chr14:36775598(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MBIP
chr14:36767786-36767787(-) m6A 3'UTR       27773535
chr14:36767831-36767832(-) m6A 3'UTR       27773535
chr14:36783949-36783950(-) m6A CDS       24981863
chr14:36784038-36784039(-) m6A CDS       24981863
chr14:36784051-36784052(-) m6A CDS       24981863
chr14:36784106-36784107(-) m6A CDS       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MBIP
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B3RC-5p
Interactor2: MBIP

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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