Detail Information

Basic Information:


  VIRBase ID:  

VHID00542948

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-5p:           EHF:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B3RC-5p EHF
miRBase
Accession/Entrez ID
MIMAT0031764 26298
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - ESE3//ESE3B//ESEJ

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase EHF
chr11:34680232-34680233(+) m6A CDS       24981863
chr11:34680423-34680424(+) m6A CDS       24981863
chr11:34680473-34680474(+) m6A CDS       24981863//22575960
chr11:34680495-34680496(+) m6A 3'UTR       24981863//22575960
chr11:34680501-34680502(+) m6A 3'UTR       24981863//22575960
chr11:34680507-34680508(+) m6A 3'UTR       24981863//22575960
chr11:34680528-34680529(+) m6A 3'UTR       24981863//22575960
chr11:34680535-34680536(+) m6A 3'UTR       24981863//22575960
chr11:34680560-34680561(+) m6A 3'UTR       24981863//22575960
chr11:34680596-34680597(+) m6A 3'UTR       24981863
chr11:34680603-34680604(+) m6A 3'UTR       24981863
chr11:34680626-34680627(+) m6A 3'UTR       24981863
chr11:34680964-34680965(+) m6A 3'UTR       24981863
chr11:34681028-34681029(+) m6A 3'UTR       24981863
chr11:34681037-34681038(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate EHF
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B3RC-5p
Interactor2: EHF

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

Starting a new search, please wait ...