Detail Information

Basic Information:


  VIRBase ID:  

VHID00541910

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-5p:           PPP6C:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B3RC-5p PPP6C
miRBase
Accession/Entrez ID		 MIMAT0031764 5537
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - PP6//PP6C

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PPP6C
chr9:127935524(-) A-I      intronic
chr9:127935682(-) A-I      intronic
chr9:127935851(-) A-I      intronic
chr9:127925838(-) A-I      intronic
chr9:127935933(-) A-I      intronic
chr9:127926229(-) A-I      intronic
chr9:127922144(-) A-I      intronic
chr9:127922126(-) A-I      intronic
chr9:127928932(-) A-I      intronic
chr9:127947825(-) A-I      intronic
chr9:127946652(-) A-I      intronic
chr9:127921674(-) A-I      intronic
chr9:127935982(-) A-I      intronic
chr9:127936100(-) A-I      intronic
chr9:127917351(-) A-I      intronic
chr9:127941345(-) A-I      intronic
chr9:127941965(-) A-I      intronic
chr9:127948091(-) A-I      intronic
chr9:127949322(-) A-I      intronic
chr9:127949337(-) A-I      intronic
chr9:127925888(-) A-I      intronic
chr9:127941997(-) A-I      intronic
chr9:127942046(-) A-I      intronic
chr9:127949472(-) A-I      intronic
chr9:127918766(-) A-I      intronic
chr9:127918793(-) A-I      intronic
chr9:127918824(-) A-I      intronic
chr9:127918846(-) A-I      intronic
chr9:127942893(-) A-I      intronic
chr9:127928919(-) A-I      intronic
chr9:127948225(-) A-I      intronic
chr9:127948905(-) A-I      intronic
chr9:127928917(-) A-I      intronic
chr9:127946580(-) A-I      intronic
chr9:127946555(-) A-I      intronic
chr9:127946545(-) A-I      intronic
chr9:127946367(-) A-I      intronic
chr9:127942995(-) A-I      intronic
chr9:127919184(-) A-I      intronic
chr9:127919230(-) A-I      intronic
chr9:127919435(-) A-I      intronic
chr9:127921052(-) A-I      intronic
chr9:127928879(-) A-I      intronic
chr9:127929032(-) A-I      intronic
chr9:127925981(-) A-I      intronic
chr9:127925966(-) A-I      intronic
chr9:127925903(-) A-I      intronic
chr9:127924607(-) A-I      intronic
chr9:127925770(-) A-I      intronic
chr9:127947891(-) A-I      intronic
chr9:127924574(-) A-I      intronic
chr9:127925258(-) A-I      intronic
chr9:127924807(-) A-I      intronic
chr9:127924693(-) A-I      intronic
chr9:127924680(-) A-I      intronic
chr9:127948947(-) A-I      intronic
chr9:127917205(-) A-I      intronic
chr9:127924557(-) A-I      intronic
chr9:127930049(-) A-I      intronic
chr9:127917978(-) A-I      intronic
chr9:127917993(-) A-I      intronic
chr9:127918701(-) A-I      intronic
chr9:127918757(-) A-I      intronic
chr9:127942903(-) A-I      intronic
chr9:127949830(-) A-I      intronic
chr9:127950899(-) A-I      intronic
chr9:127925904(-) A-I      intronic
chr9:127926585(-) A-I      intronic
chr9:127926602(-) A-I      intronic
chr9:127926683(-) A-I      intronic
chr9:127926723(-) A-I      intronic
chr9:127926749(-) A-I      intronic
chr9:127928859(-) A-I      intronic
chr9:127928872(-) A-I      intronic
chr9:127922201(-) A-I      intronic
chr9:127922153(-) A-I      intronic
chr9:127926234(-) A-I      intronic
chr9:127926311(-) A-I      intronic
chr9:127926388(-) A-I      intronic
chr9:127926389(-) A-I      intronic
chr9:127926519(-) A-I      intronic
chr9:127926617(-) A-I      intronic
chr9:127926638(-) A-I      intronic
chr9:127926644(-) A-I      intronic
chr9:127926725(-) A-I      intronic
chr9:127927150(-) A-I      intronic
chr9:127927595(-) A-I      intronic
chr9:127927616(-) A-I      intronic
chr9:127948019(-) A-I      intronic
chr9:127948020(-) A-I      intronic
chr9:127948047(-) A-I      intronic
chr9:127928936(-) A-I      intronic
chr9:127929899(-) A-I      intronic
chr9:127929935(-) A-I      intronic
chr9:127929960(-) A-I      intronic
chr9:127930225(-) A-I      intronic
chr9:127934650(-) A-I      intronic
chr9:127921215(-) A-I      intronic
chr9:127921356(-) A-I      intronic
chr9:127921355(-) A-I      intronic
chr9:127930209(-) A-I      intronic
chr9:127921046(-) A-I      intronic
chr9:127935830(-) A-I      intronic
chr9:127921180(-) A-I      intronic
chr9:127929303(-) A-I      intronic
chr9:127921123(-) A-I      intronic
chr9:127928929(-) A-I      intronic
chr9:127926670(-) A-I      intronic
chr9:127935435(-) A-I      intronic
chr9:127925911(-) A-I      intronic
chr9:127918658(-) A-I      intronic
chr9:127949399(-) A-I      intronic
chr9:127949354(-) A-I      intronic
chr9:127947921(-) A-I      intronic
chr9:127948059(-) A-I      intronic
chr9:127923993(-) A-I      intronic
chr9:127946583(-) A-I      intronic
chr9:127934735(-) A-I      intronic
chr9:127930152(-) A-I      intronic
chr9:127924888(-) A-I      intronic
chr9:127935433(-) A-I      intronic
chr9:127937405(-) A-I      intronic
chr9:127923825(-) A-I      intronic
chr9:127928909(-) A-I      intronic
chr9:127926598(-) A-I      intronic
chr9:127929295(-) A-I      intronic
chr9:127929497(-) A-I      intronic
chr9:127917325(-) A-I      intronic
chr9:127921438(-) A-I      intronic
chr9:127921051(-) A-I      intronic
chr9:127935338(-) A-I      intronic
chr9:127941289(-) A-I      intronic
chr9:127934662(-) A-I      intronic
chr9:127947969(-) A-I      intronic
chr9:127947942(-) A-I      intronic
chr9:127925848(-) A-I      intronic
chr9:127937079(-) A-I      intronic
chr9:127944728(-) A-I      intronic
chr9:127946293(-) A-I      intronic
chr9:127925997(-) A-I      intronic
chr9:127929455(-) A-I      intronic
chr9:127949700(-) A-I      intronic
chr9:127924879(-) A-I      intronic
chr9:127922296(-) A-I      intronic
chr9:127914853(-) A-I      intronic
chr9:127925989(-) A-I      intronic
chr9:127926372(-) A-I      intronic
chr9:127946585(-) A-I      intronic
chr9:127928200(-) A-I      intronic
chr9:127921224(-) A-I      intronic
chr9:127921163(-) A-I      intronic
chr9:127921069(-) A-I      intronic
chr9:127921073(-) A-I      intronic
chr9:127935392(-) A-I      intronic
chr9:127950951(-) A-I      intronic
chr9:127921112(-) A-I      intronic
chr9:127921177(-) A-I      intronic
chr9:127921161(-) A-I      intronic
chr9:127948034(-) A-I      intronic
chr9:127921038(-) A-I      intronic
chr9:127927621(-) A-I      intronic
chr9:127921078(-) A-I      intronic
chr9:127935735(-) A-I      intronic
chr9:127921353(-) A-I      intronic
chr9:127921126(-) A-I      intronic
chr9:127921037(-) A-I      intronic
chr9:127948182(-) A-I      intronic
chr9:127926660(-) A-I      intronic
chr9:127942208(-) A-I      intronic
chr9:127918691(-) A-I      intronic
chr9:127935775(-) A-I      intronic
chr9:127918735(-) A-I      intronic
chr9:127929468(-) A-I      intronic
chr9:127921698(-) A-I      intronic
chr9:127931129(-) A-I      intronic
chr9:127919181(-) A-I      intronic
chr9:127937314(-) A-I      intronic
chr9:127924885(-) A-I      intronic
chr9:127949711(-) A-I      intronic
chr9:127944664(-) A-I      intronic
chr9:127937090(-) A-I      intronic
chr9:127927626(-) A-I      intronic
chr9:127921122(-) A-I      intronic
chr9:127929494(-) A-I      intronic
chr9:127948115(-) A-I      intronic
chr9:127929016(-) A-I      intronic
chr9:127948181(-) A-I      intronic
chr9:127921119(-) A-I      intronic
chr9:127942901(-) A-I      intronic
chr9:127918756(-) A-I      intronic
chr9:127936075(-) A-I      intronic
chr9:127918726(-) A-I      intronic
chr9:127925874(-) A-I      intronic
chr9:127941412(-) A-I      intronic
chr9:127919164(-) A-I      intronic
chr9:127949805(-) A-I      intronic
chr9:127934604(-) A-I      intronic
chr9:127928885(-) A-I      intronic
chr9:127949389(-) A-I      intronic
chr9:127935774(-) A-I      intronic
chr9:127949722(-) A-I      intronic
chr9:127925847(-) A-I      intronic
chr9:127925024(-) A-I      intronic
chr9:127920035(-) A-I      intronic
chr9:127934658(-) A-I      intronic
chr9:127947559(-) A-I      intronic
chr9:127922129(-) A-I      intronic
chr9:127929257(-) A-I      intronic
chr9:127922238(-) A-I      intronic
chr9:127920976(-) A-I      intronic
chr9:127937321(-) A-I      intronic
chr9:127949679(-) A-I      intronic
chr9:127929522(-) A-I      intronic
chr9:127926290(-) A-I      intronic
chr9:127921482(-) A-I      intronic
chr9:127936944(-) A-I      intronic
chr9:127917404(-) A-I      intronic
chr9:127929860(-) A-I      intronic
chr9:127929717(-) A-I      intronic
chr9:127949605(-) A-I      intronic
chr9:127921124(-) A-I      intronic
chr9:127927665(-) A-I      intronic
chr9:127949719(-) A-I      intronic
chr9:127924973(-) A-I      intronic
chr9:127923756(-) A-I      intronic
chr9:127922219(-) A-I      intronic
chr9:127921108(-) A-I      intronic
chr9:127917926(-) A-I      intronic
chr9:127949757(-) A-I      intronic
chr9:127927677(-) A-I      intronic
chr9:127947890(-) A-I      intronic
chr9:127947561(-) A-I      intronic
chr9:127926573(-) A-I      intronic
chr9:127942031(-) A-I      intronic
chr9:127922218(-) A-I      intronic
chr9:127922034(-) A-I      intronic
chr9:127924650(-) A-I      intronic
chr9:127930843(-) A-I      intronic
chr9:127948101(-) A-I      intronic
chr9:127935962(-) A-I      intronic
chr9:127920974(-) A-I      intronic
chr9:127924580(-) A-I      intronic
chr9:127929560(-) A-I      intronic
chr9:127949727(-) A-I      intronic
chr9:127942117(-) A-I      intronic
chr9:127936003(-) A-I      intronic
chr9:127924903(-) A-I      intronic
chr9:127942113(-) A-I      intronic
chr9:127934758(-) A-I      intronic
chr9:127925980(-) A-I      intronic
chr9:127937404(-) A-I      intronic
chr9:127948151(-) A-I      intronic
chr9:127930153(-) A-I      intronic
chr9:127934511(-) A-I      intronic
chr9:127946584(-) A-I      intronic
chr9:127935401(-) A-I      intronic
chr9:127926544(-) A-I      intronic
chr9:127946292(-) A-I      intronic
chr9:127928884(-) A-I      intronic
chr9:127927146(-) A-I      intronic
chr9:127935638(-) A-I      intronic
chr9:127921065(-) A-I      intronic
chr9:127929294(-) A-I      intronic
chr9:127924818(-) A-I      intronic
chr9:127934631(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PPP6C
chr9:127913275(-) A-I intron -    22327324
chr9:127949605(-) A-I intron -    22327324
chr9:127921037(-) A-I intron -    22028664
chr9:127921038(-) A-I intron -    22028664
chr9:127921046(-) A-I intron -    22028664
chr9:127921051(-) A-I intron -    22028664
chr9:127921065(-) A-I intron -    22028664
chr9:127921069(-) A-I intron -    22028664
chr9:127921073(-) A-I intron -    22028664
chr9:127921078(-) A-I intron -    22028664
chr9:127921108(-) A-I intron -    22028664
chr9:127921112(-) A-I intron -    22028664
chr9:127921117(-) A-I intron -    22028664
chr9:127921119(-) A-I intron -    22028664
chr9:127921122(-) A-I intron -    22028664
chr9:127921123(-) A-I intron -    22028664
chr9:127921124(-) A-I intron -    22028664
chr9:127921126(-) A-I intron -    22028664
chr9:127921161(-) A-I intron -    22028664
chr9:127921163(-) A-I intron -    22028664
chr9:127921177(-) A-I intron -    22028664
chr9:127921180(-) A-I intron -    22028664
chr9:127921215(-) A-I intron -    22028664
chr9:127921218(-) A-I intron -    22028664
chr9:127921224(-) A-I intron -    22028664
chr9:127921353(-) A-I intron -    22028664
chr9:127921355(-) A-I intron -    22028664
chr9:127921356(-) A-I intron -    22028664
chr9:127922219(-) A-G intron -    22484847
chr9:127927621(-) A-G intron -    22484847
chr9:127927626(-) A-G intron -    22484847
chr9:127929295(-) A-G intron -    22484847
chr9:127934735(-) A-G intron -    22484847
chr9:127947586(-) A-G intron -    22484847
chr9:127948151(-) A-G intron -    22484847
chr9:127949605(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PPP6C
chr9:127909155-127909156(-) m6A 3'UTR       24981863
chr9:127909197-127909198(-) m6A 3'UTR       24981863
chr9:127911369-127911370(-) m6A 3'UTR       27773535//22608085
chr9:127911467-127911468(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr9:127911509-127911510(-) m6A 3'UTR       24981863//27773535//22608085
chr9:127911652-127911653(-) m6A 3'UTR       26404942//27773535
chr9:127911717-127911718(-) m6A 3'UTR       27773535
chr9:127911731-127911732(-) m6A 3'UTR       27773535
chr9:127912026-127912027(-) m6A CDS       27773535
chr9:127940930-127940931(-) Y intron       26075521
chr9:127951977-127951978(-) m6A 5'UTR//CDS       24981863
chr9:127951983-127951984(-) m6A 5'UTR//CDS       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PPP6C
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B3RC-5p
Interactor2: PPP6C

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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