Basic Information:

  VIRBase ID:  

VHID00541373

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B3RC-5p:  MIMAT0031764          CAT:  NM_001752     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B3RC-5p	CAT
miRBase Accession/Entrez ID	MIMAT0031764	847
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CAT	chr11:34466803(+) A-I      intronic chr11:34466977(+) A-I      intronic chr11:34466984(+) A-I      intronic chr11:34466782(+) A-I      intronic chr11:34466936(+) A-I      intronic chr11:34490338(+) A-I      intronic chr11:34466920(+) A-I      intronic chr11:34490388(+) A-I      intronic chr11:34466804(+) A-I      intronic chr11:34466781(+) A-I      intronic chr11:34466982(+) A-I      intronic chr11:34468418(+) A-I      intronic chr11:34462210(+) A-I      intronic chr11:34464027(+) A-I      intronic chr11:34490344(+) A-I      intronic chr11:34490368(+) A-I      intronic chr11:34491418(+) A-I      intronic chr11:34466773(+) A-I      intronic chr11:34463238(+) A-I      intronic chr11:34490412(+) A-I      intronic chr11:34463261(+) A-I      intronic chr11:34466926(+) A-I      intronic chr11:34479029(+) A-I      intronic chr11:34490387(+) A-I      intronic chr11:34466929(+) A-I      intronic chr11:34491231(+) A-I      intronic chr11:34466806(+) A-I      intronic chr11:34466919(+) A-I      intronic chr11:34491232(+) A-I      intronic chr11:34462214(+) A-I      intronic chr11:34462384(+) A-I      intronic chr11:34466859(+) A-I      intronic chr11:34463084(+) A-I      intronic chr11:34490352(+) A-I      intronic chr11:34462213(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CAT	chr11:34460510-34460511(+) m6A 5'UTR       24284625//24981863 chr11:34460550-34460551(+) m6A 5'UTR       24981863 chr11:34478297-34478298(+) m6A CDS//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CAT	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B3RC-5p
Interactor2: CAT

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg