Detail Information

Basic Information:


  VIRBase ID:  

VHID00541217

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:           MROH6:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B2-3p MROH6
miRBase
Accession/Entrez ID
MIMAT0031763 642475
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - C8orf73

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MROH6
chr8:144648377-144648378(-) m6A 3'UTR//exon       27371828
chr8:144648455-144648456(-) m6A 3'UTR//exon       27371828
chr8:144648468-144648469(-) m6A 3'UTR//exon       27371828
chr8:144648661-144648662(-) m6A 3'UTR//exon       -
chr8:144648724-144648725(-) m6A 3'UTR//exon//intron       -
chr8:144649227-144649228(-) m6A 3'UTR//exon//intron       -
chr8:144649423-144649424(-) m6A CDS//exon//intron       27371828
chr8:144654614-144654615(-) m6A CDS       27371828//27773536
chr8:144654712-144654713(-) m6A CDS       24284625//27371828//27773536
chr8:144654731-144654732(-) m6A CDS       24284625//25456834//27371828//27773536
chr8:144654773-144654774(-) m6A CDS       25456834//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MROH6
Exosome Blood     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B2-3p
Interactor2: MROH6

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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