Detail Information

Basic Information:


  VIRBase ID:  

VHID00541211

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:           POLR2J3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B2-3p POLR2J3
miRBase
Accession/Entrez ID		 MIMAT0031763 548644
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - POLR2J2//RPB11b1//RPB11b2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR POLR2J3
chr7:102190995(-) A-I      intronic
chr7:102189538(-) A-I      intronic
chr7:102189534(-) A-I      intronic
chr7:102189533(-) A-I      intronic
chr7:102188483(-) A-I      intronic
chr7:102188477(-) A-I      intronic
chr7:102201791(-) A-I      intronic
chr7:102195597(-) A-I      intronic
chr7:102195590(-) A-I      intronic
chr7:102195486(-) A-I      intronic
chr7:102195485(-) A-I      intronic
chr7:102195472(-) A-I      intronic
chr7:102195445(-) A-I      intronic
chr7:102194139(-) A-I      intronic
chr7:102194093(-) A-I      intronic
chr7:102194046(-) A-I      intronic
chr7:102193956(-) A-I      intronic
chr7:102183202(-) A-I      intronic
chr7:102183260(-) A-I      intronic
chr7:102183279(-) A-I      intronic
chr7:102191176(-) A-I      intronic
chr7:102191133(-) A-I      intronic
chr7:102186003(-) A-I      intronic
chr7:102185950(-) A-I      intronic
chr7:102185874(-) A-I      intronic
chr7:102191070(-) A-I      intronic
chr7:102183333(-) A-I      intronic
chr7:102183574(-) A-I      intronic
chr7:102184761(-) A-I      intronic
chr7:102184777(-) A-I      intronic
chr7:102184804(-) A-I      intronic
chr7:102185869(-) A-I      intronic
chr7:102185947(-) A-I      intronic
chr7:102186063(-) A-I      intronic
chr7:102186071(-) A-I      intronic
chr7:102186083(-) A-I      intronic
chr7:102186084(-) A-I      intronic
chr7:102186323(-) A-I      intronic
chr7:102186335(-) A-I      intronic
chr7:102188410(-) A-I      intronic
chr7:102188447(-) A-I      intronic
chr7:102205869(-) A-I      intronic
chr7:102205816(-) A-I      intronic
chr7:102188473(-) A-I      intronic
chr7:102205798(-) A-I      intronic
chr7:102205797(-) A-I      intronic
chr7:102205738(-) A-I      intronic
chr7:102205702(-) A-I      intronic
chr7:102205699(-) A-I      intronic
chr7:102205343(-) A-I      intronic
chr7:102205339(-) A-I      intronic
chr7:102205335(-) A-I      intronic
chr7:102205303(-) A-I      intronic
chr7:102205299(-) A-I      intronic
chr7:102205295(-) A-I      intronic
chr7:102188521(-) A-I      intronic
chr7:102188523(-) A-I      intronic
chr7:102189368(-) A-I      intronic
chr7:102189370(-) A-I      intronic
chr7:102189395(-) A-I      intronic
chr7:102189449(-) A-I      intronic
chr7:102205271(-) A-I      intronic
chr7:102205267(-) A-I      intronic
chr7:102205191(-) A-I      intronic
chr7:102189464(-) A-I      intronic
chr7:102191010(-) A-I      intronic
chr7:102205172(-) A-I      intronic
chr7:102204750(-) A-I      intronic
chr7:102204742(-) A-I      intronic
chr7:102204719(-) A-I      intronic
chr7:102204583(-) A-I      intronic
chr7:102204528(-) A-I      intronic
chr7:102201826(-) A-I      intronic
chr7:102189469(-) A-I      intronic
chr7:102189489(-) A-I      intronic
chr7:102189491(-) A-I      intronic
chr7:102189494(-) A-I      intronic
chr7:102189500(-) A-I      intronic
chr7:102189504(-) A-I      intronic
chr7:102206953(-) A-I      3'UTR
chr7:102178594(-) A-I      3'UTR
chr7:102206549(-) A-I      3'UTR
chr7:102206545(-) A-I      3'UTR
chr7:102206473(-) A-I      3'UTR
chr7:102206520(-) A-I      3'UTR
chr7:102206591(-) A-I      3'UTR
chr7:102206640(-) A-I      3'UTR
chr7:102206513(-) A-I      3'UTR
chr7:102206594(-) A-I      3'UTR
chr7:102178655(-) A-I      3'UTR
chr7:102206532(-) A-I      3'UTR
chr7:102206585(-) A-I      3'UTR
chr7:102206648(-) A-I      3'UTR
chr7:102206855(-) A-I      3'UTR
chr7:102206856(-) A-I      3'UTR
chr7:102206937(-) A-I      3'UTR
chr7:102206616(-) A-I      3'UTR
chr7:102206615(-) A-I      3'UTR
chr7:102206614(-) A-I      3'UTR
chr7:102206946(-) A-I      3'UTR
chr7:102206559(-) A-I      3'UTR
chr7:102205111(-) A-I      intronic
chr7:102183323(-) A-I      intronic
chr7:102201800(-) A-I      intronic
chr7:102185937(-) A-I      intronic
chr7:102184714(-) A-I      intronic
chr7:102184766(-) A-I      intronic
chr7:102185936(-) A-I      intronic
chr7:102179509(-) A-I      intronic
chr7:102185856(-) A-I      intronic
chr7:102185531(-) A-I      intronic
chr7:102190529(-) A-I      intronic
chr7:102179783(-) A-I      intronic
chr7:102185929(-) A-I      intronic
chr7:102189513(-) A-I      intronic
chr7:102199258(-) A-I      intronic
chr7:102185883(-) A-I      intronic
chr7:102200256(-) A-I      intronic
chr7:102179701(-) A-I      intronic
chr7:102179684(-) A-I      intronic
chr7:102179775(-) A-I      intronic
chr7:102179639(-) A-I      intronic
chr7:102185894(-) A-I      intronic
chr7:102179721(-) A-I      intronic
chr7:102179675(-) A-I      intronic
chr7:102200261(-) A-I      intronic
chr7:102178616(-) A-I      3'UTR
chr7:102206920(-) A-I      3'UTR
chr7:102178719(-) A-I      3'UTR
chr7:102178713(-) A-I      3'UTR
chr7:102178546(-) A-I      3'UTR
chr7:102206923(-) A-I      3'UTR
chr7:102178572(-) A-I      3'UTR
chr7:102178496(-) A-I      3'UTR
chr7:102206451(-) A-I      3'UTR
chr7:102178626(-) A-I      3'UTR
chr7:102178495(-) A-I      3'UTR
chr7:102206938(-) A-I      3'UTR
chr7:102178675(-) A-I      3'UTR
chr7:102178608(-) A-I      3'UTR
chr7:102206951(-) A-I      3'UTR
chr7:102178575(-) A-I      3'UTR
chr7:102185841(-) A-I      intronic
chr7:102189428(-) A-I      intronic
chr7:102185920(-) A-I      intronic
chr7:102192254(-) A-I      intronic
chr7:102199233(-) A-I      intronic
chr7:102183437(-) A-I      intronic
chr7:102191111(-) A-I      intronic
chr7:102199282(-) A-I      intronic
chr7:102192214(-) A-I      intronic
chr7:102179598(-) A-I      intronic
chr7:102185867(-) A-I      intronic
chr7:102185973(-) A-I      intronic
chr7:102179638(-) A-I      intronic
chr7:102191151(-) A-I      intronic
chr7:102184553(-) A-I      intronic
chr7:102191146(-) A-I      intronic
chr7:102191071(-) A-I      intronic
chr7:102188411(-) A-I      intronic
chr7:102179625(-) A-I      intronic
chr7:102183358(-) A-I      intronic
chr7:102185918(-) A-I      intronic
chr7:102189465(-) A-I      intronic
chr7:102185881(-) A-I      intronic
chr7:102185901(-) A-I      intronic
chr7:102191152(-) A-I      intronic
chr7:102184736(-) A-I      intronic
chr7:102179547(-) A-I      intronic
chr7:102183345(-) A-I      intronic
chr7:102191065(-) A-I      intronic
chr7:102183409(-) A-I      intronic
chr7:102186025(-) A-I      intronic
chr7:102183363(-) A-I      intronic
chr7:102186002(-) A-I      intronic
chr7:102204586(-) A-I      intronic
chr7:102189378(-) A-I      intronic
chr7:102185985(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED POLR2J3
chr7:102178546(-) A-I exon 3'UTR    15258596
chr7:102178608(-) A-I exon 3'UTR    15258596
chr7:102178626(-) A-I exon 3'UTR    15258596
chr7:102178675(-) A-I exon 3'UTR    15258596
chr7:102185856(-) A-I intron -    15258596
chr7:102185894(-) A-I intron -    15258596
chr7:102185901(-) A-I intron -    15258596
chr7:102189378(-) A-I intron -    15258596
chr7:102189428(-) A-I intron -    15258596
chr7:102189465(-) A-I intron -    15258596
chr7:102189478(-) A-I intron -    15258596
chr7:102189501(-) A-I intron -    15258596
chr7:102189640(-) A-I intron -    15258596
chr7:102190367(-) A-I intron -    15258596
chr7:102190412(-) A-I intron -    15258596
chr7:102190529(-) A-I intron -    15258596
chr7:102191065(-) A-I intron -    15258596
chr7:102191071(-) A-I intron -    15258596
chr7:102191111(-) A-I intron -    15258596
chr7:102191146(-) A-I intron -    15258596
chr7:102191151(-) A-I intron -    15258596
chr7:102191152(-) A-I intron -    15258596
chr7:102191230(-) A-I intron -    15258596
chr7:102192214(-) A-I intron -    15258596
chr7:102192254(-) A-I intron -    15258596
chr7:102192270(-) A-I intron -    15258596
chr7:102199233(-) A-I intron -    15258596
chr7:102199245(-) A-I intron -    15258596
chr7:102199258(-) A-I intron -    15258596
chr7:102199282(-) A-I intron -    15258596
chr7:102199284(-) A-I intron -    15258596
chr7:102206920(-) A-I intron -    15258596
chr7:102206922(-) A-I intron -    15258596
chr7:102206923(-) A-I intron -    15258596
chr7:102206938(-) A-I intron -    15258596
chr7:102206951(-) A-I intron -    15258596
chr7:102206974(-) A-I intron -    15258596
chr7:102178744(-) A-T exon 3'UTR    21725310
chr7:102179509(-) A-G intron -    22484847
chr7:102179547(-) A-G intron -    22484847
chr7:102179638(-) A-G intron -    22484847
chr7:102183323(-) A-G intron -    22484847
chr7:102183362(-) A-G intron -    22484847
chr7:102183363(-) A-G intron -    22484847
chr7:102183385(-) A-G intron -    22484847
chr7:102183437(-) A-G intron -    22484847
chr7:102183463(-) C-T intron -    22484847
chr7:102184513(-) A-G intron -    22484847
chr7:102184736(-) A-G intron -    22484847
chr7:102184766(-) A-G intron -    22484847
chr7:102185531(-) A-G intron -    22484847
chr7:102185856(-) A-G intron -    22484847
chr7:102185867(-) A-G intron -    22484847
chr7:102185883(-) A-G intron -    22484847
chr7:102185901(-) A-G intron -    22484847
chr7:102185920(-) A-G intron -    22484847
chr7:102185923(-) A-G intron -    22484847
chr7:102185929(-) A-G intron -    22484847
chr7:102185936(-) A-G intron -    22484847
chr7:102185937(-) A-G intron -    22484847
chr7:102185961(-) A-G intron -    22484847
chr7:102185963(-) A-G intron -    22484847
chr7:102185973(-) A-G intron -    22484847
chr7:102185984(-) A-G intron -    22484847
chr7:102185985(-) A-G intron -    22484847
chr7:102186002(-) A-G intron -    22484847
chr7:102186025(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase POLR2J3
chr7:102210353-102210354(-) m6A CDS//exon//intron       24284625//27773535
chr7:102212189-102212190(-) m6A exon//intron       24284625//27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate POLR2J3
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B2-3p
Interactor2: POLR2J3

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

Starting a new search, please wait ...