Detail Information

Basic Information:


  VIRBase ID:  

VHID00541154

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:           NUGGC:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B2-3p NUGGC
miRBase
Accession/Entrez ID		 MIMAT0031763 389643
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - C8orf80//HMFN0672//SLIP-GC//SLIPGC

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NUGGC
chr8:27881646(-) A-I      intronic
chr8:27917499(-) A-I      intronic
chr8:27909356(-) A-I      intronic
chr8:27935027(-) A-I      intronic
chr8:27917494(-) A-I      intronic
chr8:27937596(-) A-I      intronic
chr8:27933922(-) A-I      intronic
chr8:27939247(-) A-I      intronic
chr8:27920012(-) A-I      intronic
chr8:27920010(-) A-I      intronic
chr8:27915036(-) A-I      intronic
chr8:27928236(-) A-I      intronic
chr8:27917438(-) A-I      intronic
chr8:27915614(-) A-I      intronic
chr8:27915041(-) A-I      intronic
chr8:27936974(-) A-I      intronic
chr8:27934830(-) A-I      intronic
chr8:27936945(-) A-I      intronic
chr8:27936824(-) A-I      intronic
chr8:27914996(-) A-I      intronic
chr8:27933923(-) A-I      intronic
chr8:27914883(-) A-I      intronic
chr8:27912635(-) A-I      intronic
chr8:27920034(-) A-I      intronic
chr8:27911807(-) A-I      intronic
chr8:27920004(-) A-I      intronic
chr8:27934033(-) A-I      intronic
chr8:27915037(-) A-I      intronic
chr8:27879854(-) A-I      3'UTR
chr8:27880360(-) A-I      3'UTR
chr8:27880405(-) A-I      3'UTR
chr8:27880698(-) A-I      3'UTR
chr8:27880703(-) A-I      3'UTR
chr8:27880722(-) A-I      3'UTR
chr8:27880439(-) A-I      3'UTR
chr8:27880479(-) A-I      3'UTR
chr8:27880431(-) A-I      3'UTR
chr8:27879942(-) A-I      3'UTR
chr8:27879881(-) A-I      3'UTR
chr8:27879878(-) A-I      3'UTR
chr8:27879876(-) A-I      3'UTR
chr8:27880581(-) A-I      3'UTR
chr8:27880524(-) A-I      3'UTR
chr8:27880440(-) A-I      3'UTR
chr8:27880476(-) A-I      3'UTR
chr8:27880448(-) A-I      3'UTR
chr8:27880191(-) A-I      3'UTR
chr8:27879870(-) A-I      3'UTR
chr8:27879856(-) A-I      3'UTR
chr8:27879855(-) A-I      3'UTR
chr8:27880422(-) A-I      3'UTR
chr8:27879852(-) A-I      3'UTR
chr8:27879847(-) A-I      3'UTR
chr8:27879844(-) A-I      3'UTR
chr8:27879836(-) A-I      3'UTR
chr8:27879824(-) A-I      3'UTR
chr8:27879787(-) A-I      3'UTR
chr8:27880333(-) A-I      3'UTR
chr8:27879768(-) A-I      3'UTR
chr8:27879752(-) A-I      3'UTR
chr8:27879744(-) A-I      3'UTR
chr8:27879687(-) A-I      3'UTR
chr8:27880620(-) A-I      3'UTR
chr8:27880505(-) A-I      3'UTR
chr8:27880661(-) A-I      3'UTR
chr8:27928512(-) A-I      intronic
chr8:27930776(-) A-I      intronic
chr8:27917416(-) A-I      intronic
chr8:27933889(-) A-I      intronic
chr8:27914961(-) A-I      intronic
chr8:27879827(-) A-I      3'UTR
chr8:27880504(-) A-I      3'UTR
chr8:27880633(-) A-I      3'UTR
chr8:27880194(-) A-I      3'UTR
chr8:27879773(-) A-I      3'UTR
chr8:27879816(-) A-I      3'UTR
chr8:27879840(-) A-I      3'UTR
chr8:27880488(-) A-I      3'UTR
chr8:27880327(-) A-I      3'UTR
chr8:27879948(-) A-I      3'UTR
chr8:27880464(-) A-I      3'UTR
chr8:27880631(-) A-I      3'UTR
chr8:27880672(-) A-I      3'UTR
chr8:27879772(-) A-I      3'UTR
chr8:27880673(-) A-I      3'UTR
chr8:27880425(-) A-I      3'UTR
chr8:27879743(-) A-I      3'UTR
chr8:27879733(-) A-I      3'UTR
chr8:27880364(-) A-I      3'UTR
chr8:27880655(-) A-I      3'UTR
chr8:27879791(-) A-I      3'UTR
chr8:27879947(-) A-I      3'UTR
chr8:27880530(-) A-I      3'UTR
chr8:27880643(-) A-I      3'UTR
chr8:27880501(-) A-I      3'UTR
chr8:27933954(-) A-I      intronic
chr8:27933953(-) A-I      intronic
chr8:27933887(-) A-I      intronic
chr8:27934871(-) A-I      intronic
chr8:27937000(-) A-I      intronic
chr8:27936994(-) A-I      intronic
chr8:27939206(-) A-I      intronic
chr8:27914997(-) A-I      intronic
chr8:27915077(-) A-I      intronic
chr8:27939391(-) A-I      intronic
chr8:27939312(-) A-I      intronic
chr8:27939237(-) A-I      intronic
chr8:27936935(-) A-I      intronic
chr8:27933888(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NUGGC
chr8:27879947(-) A-I exon 3'UTR    22327324
chr8:27880433(-) A-I exon 3'UTR    22327324
chr8:27880553(-) A-I exon 3'UTR    22327324
chr8:27882391(-) A-I intron -    22327324
chr8:27879947(-) A-G exon 3'UTR    21725310   //22484847
chr8:27880194(-) A-G exon 3'UTR    21725310   //22484847
chr8:27880679(-) A-G exon 3'UTR    21725310   //22484847
chr8:27879674(-) G-A exon 3'UTR    22484847
chr8:27879772(-) A-G exon 3'UTR    22484847
chr8:27879791(-) A-G exon 3'UTR    22484847
chr8:27879804(-) A-G exon 3'UTR    22484847
chr8:27880364(-) A-G exon 3'UTR    22484847
chr8:27880433(-) A-G exon 3'UTR    22484847
chr8:27880464(-) A-G exon 3'UTR    22484847
chr8:27880504(-) A-G exon 3'UTR    22484847
chr8:27880631(-) A-G exon 3'UTR    22484847
chr8:27880643(-) A-G exon 3'UTR    22484847
chr8:27880693(-) A-G exon 3'UTR    22484847
chr8:27880711(-) A-G exon 3'UTR    22484847
chr8:27915483(-) A-G intron -    22484847
chr8:27928096(-) A-G intron -    22484847
chr8:27930776(-) A-G intron -    22484847
chr8:27933887(-) A-G intron -    22484847
chr8:27933888(-) A-G intron -    22484847
chr8:27933889(-) A-G intron -    22484847
chr8:27933953(-) A-G intron -    22484847
chr8:27933954(-) A-G intron -    22484847
chr8:27934109(-) A-G intron -    22484847
chr8:27934829(-) A-G intron -    22484847
chr8:27936935(-) A-G intron -    22484847
chr8:27939312(-) A-G intron -    22484847

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NUGGC
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B2-3p
Interactor2: NUGGC

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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