Basic Information:

  VIRBase ID:  

VHID00540944

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:  MIMAT0031763          SLC29A4:  NM_001040661     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2-3p	SLC29A4
miRBase Accession/Entrez ID	MIMAT0031763	222962
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ENT4//PMAT

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC29A4	chr7:5341816(+) A-I      intronic chr7:5341685(+) A-I      intronic chr7:5342099(+) A-I      intronic chr7:5341844(+) A-I      intronic chr7:5342094(+) A-I      intronic chr7:5331875(+) A-I      intronic chr7:5342131(+) A-I      intronic chr7:5331959(+) A-I      intronic chr7:5341989(+) A-I      intronic chr7:5341737(+) A-I      intronic chr7:5341739(+) A-I      intronic chr7:5333482(+) A-I      intronic chr7:5341951(+) A-I      intronic chr7:5333665(+) A-I      intronic chr7:5340618(+) A-I      intronic chr7:5341762(+) A-I      intronic chr7:5328770(+) A-I      intronic chr7:5340761(+) A-I      intronic chr7:5328867(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC29A4	chr7:5322690-5322691(+) m6A 5'UTR//intron       24209618 chr7:5327502-5327503(+) m6A CDS       24209618 chr7:5330470-5330471(+) m6A CDS       24284625 chr7:5330756-5330757(+) m6A CDS       24284625 chr7:5342430-5342431(+) m6A CDS//intron       24284625//24209618 chr7:5342728-5342729(+) m6A 3'UTR//intron       24284625//24209618//24981863 chr7:5342755-5342756(+) m6A 3'UTR//intron       24284625//24209618//24981863 chr7:5342761-5342762(+) m6A 3'UTR//intron       24284625//24209618//24981863 chr7:5342908-5342909(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//22608085 chr7:5342915-5342916(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//22608085 chr7:5343011-5343012(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:5343025-5343026(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:5343105-5343106(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:5343119-5343120(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:5343166-5343167(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr7:5343198-5343199(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr7:5343231-5343232(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr7:5343412-5343413(+) m6A 3'UTR       24284625//24209618//25456834 chr7:5343421-5343422(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr7:5343482-5343483(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr7:5343563-5343564(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr7:5343682-5343683(+) m6A 3'UTR       24284625//24209618//24981863 chr7:5343733-5343734(+) m6A 3'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC29A4	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2-3p
Interactor2: SLC29A4

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg