Basic Information:

  VIRBase ID:  

VHID00540915

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:  MIMAT0031763          CYB561A3:  NM_001300763     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2-3p	CYB561A3
miRBase Accession/Entrez ID	MIMAT0031763	220002
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CYBASC3//LCYTB

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CYB561A3	chr11:61119746(-) A-I      3'UTR chr11:61119476(-) A-I      3'UTR chr11:61120050(-) A-I      3'UTR chr11:61123488(-) A-I      intronic chr11:61122031(-) A-I      intronic chr11:61123388(-) A-I      intronic chr11:61125624(-) A-I      intronic chr11:61123403(-) A-I      intronic chr11:61123477(-) A-I      intronic chr11:61123397(-) A-I      intronic chr11:61123495(-) A-I      intronic chr11:61123442(-) A-I      intronic chr11:61123452(-) A-I      intronic chr11:61123380(-) A-I      intronic chr11:61119034(-) A-I      3'UTR chr11:61119143(-) A-I      3'UTR chr11:61119191(-) A-I      3'UTR chr11:61120089(-) A-I      3'UTR chr11:61119257(-) A-I      3'UTR chr11:61119253(-) A-I      3'UTR chr11:61119241(-) A-I      3'UTR chr11:61119230(-) A-I      3'UTR chr11:61118910(-) A-I      3'UTR chr11:61118900(-) A-I      3'UTR chr11:61119277(-) A-I      3'UTR chr11:61118867(-) A-I      3'UTR chr11:61119334(-) A-I      3'UTR chr11:61120119(-) A-I      3'UTR chr11:61119372(-) A-I      3'UTR chr11:61119347(-) A-I      3'UTR chr11:61118873(-) A-I      3'UTR chr11:61120107(-) A-I      3'UTR chr11:61118890(-) A-I      3'UTR chr11:61119377(-) A-I      3'UTR chr11:61120008(-) A-I      3'UTR chr11:61120021(-) A-I      3'UTR chr11:61118929(-) A-I      3'UTR chr11:61118930(-) A-I      3'UTR chr11:61120064(-) A-I      3'UTR chr11:61122030(-) A-I      intronic chr11:61123305(-) A-I      intronic chr11:61122541(-) A-I      intronic chr11:61122376(-) A-I      intronic chr11:61122512(-) A-I      intronic chr11:61121923(-) A-I      intronic chr11:61123538(-) A-I      intronic chr11:61125632(-) A-I      intronic chr11:61122446(-) A-I      intronic chr11:61122082(-) A-I      intronic chr11:61122018(-) A-I      intronic chr11:61122406(-) A-I      intronic chr11:61125671(-) A-I      intronic chr11:61122635(-) A-I      intronic chr11:61122005(-) A-I      intronic chr11:61122612(-) A-I      intronic chr11:61121869(-) A-I      intronic chr11:61122373(-) A-I      intronic chr11:61123372(-) A-I      intronic chr11:61119575(-) A-I      3'UTR chr11:61119571(-) A-I      3'UTR chr11:61119263(-) A-I      3'UTR chr11:61120087(-) A-I      3'UTR chr11:61120011(-) A-I      3'UTR chr11:61119131(-) A-I      3'UTR chr11:61119751(-) A-I      3'UTR chr11:61119128(-) A-I      3'UTR chr11:61119269(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CYB561A3	chr11:61116565-61116566(-) m6A 3'UTR//exon       25456834//27773535 chr11:61116764-61116765(-) m6A 3'UTR//exon       27773535 chr11:61116958-61116959(-) m6A 3'UTR//exon       25456834//24981863 chr11:61117012-61117013(-) m6A 3'UTR//exon       25456834//24981863 chr11:61120545-61120546(-) m6A 3'UTR//CDS//exon//intron       25456834//27773535 chr11:61120853-61120854(-) m6A exon//intron       24981863 chr11:61120860-61120861(-) m6A exon//intron       24981863 chr11:61120870-61120871(-) m6A exon//intron       24981863 chr11:61124082-61124083(-) Y CDS//exon//intron       26075521 chr11:61129432-61129433(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27371828//27773536 chr11:61129517-61129518(-) m6A 5'UTR//exon       24284625//25456834//24981863//27371828//27773536//22608085 chr11:61129530-61129531(-) m6A 5'UTR//exon       25456834//24981863//27371828//27773536//22608085 chr11:61129592-61129593(-) m6A 5'UTR//exon       24284625//25456834//24981863//27773536//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CYB561A3	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2-3p
Interactor2: CYB561A3

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg