Basic Information:

  VIRBase ID:  

VHID00540790

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:  MIMAT0031763          PPM1L:  NM_001317911     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2-3p	PPM1L
miRBase Accession/Entrez ID	MIMAT0031763	151742
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PP2C-epsilon//PP2CE//PPM1-LIKE

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PPM1L	chr3:160741864(+) A-I      intronic chr3:160741855(+) A-I      intronic chr3:160741926(+) A-I      intronic chr3:160741879(+) A-I      intronic chr3:160494518(+) A-I      intronic chr3:160501309(+) A-I      intronic chr3:160501241(+) A-I      intronic chr3:160776013(+) A-I      intronic chr3:160776012(+) A-I      intronic chr3:160767015(+) A-I      intronic chr3:160767008(+) A-I      intronic chr3:160494572(+) A-I      intronic chr3:160756308(+) A-I      intronic chr3:160756239(+) A-I      intronic chr3:160590568(+) A-I      intronic chr3:160590563(+) A-I      intronic chr3:160590552(+) A-I      intronic chr3:160521931(+) A-I      intronic chr3:160521927(+) A-I      intronic chr3:160776068(+) A-I      intronic chr3:160494661(+) A-I      intronic chr3:160494909(+) A-I      intronic chr3:160494578(+) A-I      intronic chr3:160591465(+) A-I      intronic chr3:160590660(+) A-I      intronic chr3:160494508(+) A-I      intronic chr3:160696605(+) A-I      intronic chr3:160699604(+) A-I      intronic chr3:160494492(+) A-I      intronic chr3:160521994(+) A-I      intronic chr3:160698376(+) A-I      intronic chr3:160494929(+) A-I      intronic chr3:160613062(+) A-I      intronic chr3:160584769(+) A-I      intronic chr3:160698201(+) A-I      intronic chr3:160756242(+) A-I      intronic chr3:160756265(+) A-I      intronic chr3:160737725(+) A-I      intronic chr3:160523334(+) A-I      intronic chr3:160523324(+) A-I      intronic chr3:160737889(+) A-I      intronic chr3:160756233(+) A-I      intronic chr3:160521982(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PPM1L	chr3:160655287(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PPM1L	chr3:160473679-160473680(+) m6A 5'UTR       25456834//24981863//22608085 chr3:160473704-160473705(+) m6A 5'UTR       22608085 chr3:160473726-160473727(+) m6A 5'UTR       22608085 chr3:160473894-160473895(+) m6A 5'UTR       22608085 chr3:160474037-160474038(+) m6A 5'UTR       24981863//22608085 chr3:160474161-160474162(+) m6A CDS       24981863//22608085 chr3:160474348-160474349(+) m6A CDS       - chr3:160474364-160474365(+) m6A CDS       - chr3:160474403-160474404(+) m6A CDS       - chr3:160474415-160474416(+) m6A CDS       - chr3:160786830-160786831(+) m6A CDS//exon       24981863//22575960//22608085 chr3:160786930-160786931(+) m6A CDS//exon       24981863//22608085 chr3:160786945-160786946(+) m6A 3'UTR//exon       24981863//22608085 chr3:160786972-160786973(+) m6A 3'UTR//exon       24981863//22608085 chr3:160786980-160786981(+) m6A 3'UTR//exon       24981863//22608085 chr3:160787051-160787052(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr3:160787100-160787101(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr3:160787133-160787134(+) m6A 3'UTR//exon       24981863//22608085 chr3:160787325-160787326(+) m6A 3'UTR//exon       24284625//22608085 chr3:160787330-160787331(+) m6A 3'UTR//exon       24284625//22608085 chr3:160787354-160787355(+) m6A 3'UTR//exon       24284625//25456834//22608085 chr3:160787416-160787417(+) m6A 3'UTR//exon       25456834//22608085 chr3:160787522-160787523(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr3:160787548-160787549(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr3:160787614-160787615(+) m6A 3'UTR//exon       24284625//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PPM1L	Cytosol K562 cells     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2-3p
Interactor2: PPM1L

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg