Basic Information:

  VIRBase ID:  

VHID00540666

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:  MIMAT0031763          TMEM18:  NM_152834     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2-3p	TMEM18
miRBase Accession/Entrez ID	MIMAT0031763	129787
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	lncND

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMEM18	chr2:669602(-) A-I      NonSyn:Lys->Arg chr2:669616(-) A-I      Syn:Arg->Arg chr2:669587(-) A-I      NonSyn:Glu->Gly chr2:669594(-) A-I      NonSyn:Arg->Gly chr2:669613(-) A-I      Syn:Arg->Arg chr2:669607(-) A-I      Syn:Glu->Glu chr2:669597(-) A-I      NonSyn:Arg->Gly chr2:669608(-) A-I      NonSyn:Glu->Gly chr2:669601(-) A-I      Syn:Lys->Lys chr2:669603(-) A-I      NonSyn:Lys->Glu

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM18	chr2:669469-669470(-) m6A 3'UTR//exon       24981863 chr2:669583-669584(-) m6A 3'UTR//CDS//exon       - chr2:672813-672814(-) m6A 3'UTR//CDS//exon       24284625 chr2:675537-675538(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773536//22608085 chr2:675617-675618(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773536//22608085 chr2:675622-675623(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773536//22608085 chr2:675660-675661(-) m6A exon//intron       24284625//24209618//25456834//24981863//27773536//22608085 chr2:675680-675681(-) m6A exon//intron       24284625//24209618//25456834//24981863//27773536//22608085 chr2:675739-675740(-) m6A exon//intron       24284625//24209618//25456834//24981863//22608085 chr2:675878-675879(-) m6A 3'UTR//5'UTR//exon//intron       24284625//24981863//22608085 chr2:675941-675942(-) m6A 3'UTR//5'UTR//exon//intron       24284625//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM18	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2-3p
Interactor2: TMEM18

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg