Basic Information:

  VIRBase ID:  

VHID00540582

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:  MIMAT0031763          ACAP3:  NM_030649     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2-3p	ACAP3
miRBase Accession/Entrez ID	MIMAT0031763	116983
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CENTB5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ACAP3	chr1:1236461(-) A-I      intronic chr1:1236536(-) A-I      intronic chr1:1236342(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ACAP3	chr1:1227875(-) T-G exon 3'UTR    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ACAP3	chr1:1227884-1227885(-) m6A 3'UTR//exon       24284625//27773535 chr1:1227929-1227930(-) m6A 3'UTR//exon       24284625//27773535 chr1:1228164-1228165(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535 chr1:1228221-1228222(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535 chr1:1228340-1228341(-) m6A 3'UTR//exon       - chr1:1228564-1228565(-) m6A 3'UTR//exon       24284625//27773535 chr1:1228695-1228696(-) m6A 3'UTR//exon       27773535 chr1:1229250-1229251(-) m6A CDS//exon       27773536//22575960 chr1:1229265-1229266(-) m6A CDS//exon       27773536//22575960 chr1:1229280-1229281(-) m6A CDS//exon       27773536 chr1:1229520-1229521(-) m6A CDS//exon       27773536 chr1:1229529-1229530(-) m6A CDS//exon       27773536 chr1:1229965-1229966(-) m6A CDS//exon       24209618//27773536 chr1:1230114-1230115(-) m6A CDS//exon//intron       27773536 chr1:1230203-1230204(-) m6A exon//intron       27773536 chr1:1230219-1230220(-) m6A exon//intron       27773536 chr1:1231291-1231292(-) m6A CDS//exon       27773536 chr1:1231312-1231313(-) m6A CDS//exon       22575960 chr1:1231414-1231415(-) m6A CDS//exon       22575960 chr1:1231867-1231868(-) m6A CDS//exon       27773536 chr1:1232005-1232006(-) m6A CDS//exon       27371828//27773536 chr1:1233434-1233435(-) m6A CDS//exon       27773536 chr1:1233607-1233608(-) m6A exon//intron       - chr1:1233630-1233631(-) m6A exon//intron       - chr1:1233757-1233758(-) m1A CDS//exon       26863196 chr1:1233983-1233984(-) Y CDS//exon       26075521 chr1:1235280-1235281(-) m6A CDS//exon       24284625 chr1:1235380-1235381(-) m6A CDS//exon       24284625 chr1:1235541-1235542(-) m6A CDS//exon       24284625//27371828 chr1:1235557-1235558(-) m1A CDS//exon       26863410 chr1:1235901-1235902(-) m6A 3'UTR//CDS//exon       24284625//27371828//27773536 chr1:1236018-1236019(-) m6A 3'UTR//CDS//exon       24981863//27773535//27371828//27773536 chr1:1236049-1236050(-) m6A 3'UTR//CDS//exon       27773535//27371828//27773536 chr1:1236840-1236841(-) m6A exon//intron       27773535//27371828//27773536 chr1:1236863-1236864(-) m6A exon//intron       27773535//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ACAP3	Chromatin K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2-3p
Interactor2: ACAP3

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg