Detail Information

Basic Information:


  VIRBase ID:  

VHID00540513

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:           ZNF670:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B2-3p ZNF670
miRBase
Accession/Entrez ID		 MIMAT0031763 93474
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF670
chr1:247211507(-) A-I      intronic
chr1:247211515(-) A-I      intronic
chr1:247211520(-) A-I      intronic
chr1:247211522(-) A-I      intronic
chr1:247209238(-) A-I      intronic
chr1:247209246(-) A-I      intronic
chr1:247235340(-) A-I      intronic
chr1:247235339(-) A-I      intronic
chr1:247235298(-) A-I      intronic
chr1:247228307(-) A-I      intronic
chr1:247228282(-) A-I      intronic
chr1:247228281(-) A-I      intronic
chr1:247228275(-) A-I      intronic
chr1:247228199(-) A-I      intronic
chr1:247228183(-) A-I      intronic
chr1:247226776(-) A-I      intronic
chr1:247226773(-) A-I      intronic
chr1:247226763(-) A-I      intronic
chr1:247226761(-) A-I      intronic
chr1:247226737(-) A-I      intronic
chr1:247226727(-) A-I      intronic
chr1:247216687(-) A-I      intronic
chr1:247216690(-) A-I      intronic
chr1:247216691(-) A-I      intronic
chr1:247216767(-) A-I      intronic
chr1:247235904(-) A-I      intronic
chr1:247226720(-) A-I      intronic
chr1:247226721(-) A-I      intronic
chr1:247228179(-) A-I      intronic
chr1:247213951(-) A-I      intronic
chr1:247213889(-) A-I      intronic
chr1:247235354(-) A-I      intronic
chr1:247214462(-) A-I      intronic
chr1:247228255(-) A-I      intronic
chr1:247214502(-) A-I      intronic
chr1:247199738(-) A-I      3'UTR
chr1:247199864(-) A-I      3'UTR
chr1:247235513(-) A-I      intronic
chr1:247212523(-) A-I      intronic
chr1:247228356(-) A-I      intronic
chr1:247212564(-) A-I      intronic
chr1:247212550(-) A-I      intronic
chr1:247212511(-) A-I      intronic
chr1:247214354(-) A-I      intronic
chr1:247213957(-) A-I      intronic
chr1:247224688(-) A-I      intronic
chr1:247212537(-) A-I      intronic
chr1:247204136(-) A-I      intronic
chr1:247214049(-) A-I      intronic
chr1:247199882(-) A-I      3'UTR
chr1:247213956(-) A-I      intronic
chr1:247204176(-) A-I      intronic
chr1:247211956(-) A-I      intronic
chr1:247199869(-) A-I      3'UTR
chr1:247210011(-) A-I      intronic
chr1:247235941(-) A-I      intronic
chr1:247235730(-) A-I      intronic
chr1:247235729(-) A-I      intronic
chr1:247235830(-) A-I      intronic
chr1:247235555(-) A-I      intronic
chr1:247213916(-) A-I      intronic
chr1:247212538(-) A-I      intronic
chr1:247199895(-) A-I      3'UTR
chr1:247210580(-) A-I      intronic
chr1:247213942(-) A-I      intronic
chr1:247212524(-) A-I      intronic
chr1:247231457(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF670
chr1:247200525-247200526(-) m6A 3'UTR       24981863//27773535//22608085
chr1:247200571-247200572(-) m6A 3'UTR       24981863//27773535//22608085
chr1:247200581-247200582(-) m6A 3'UTR       24981863//27773535//22608085
chr1:247200638-247200639(-) m6A 3'UTR       24981863//27773535//22608085
chr1:247200655-247200656(-) m6A 3'UTR       24981863//27773535//22608085
chr1:247200674-247200675(-) m6A 3'UTR       24981863//27773535//22608085
chr1:247200732-247200733(-) m6A 3'UTR       24981863//27773535//22608085
chr1:247200746-247200747(-) m6A 3'UTR       24981863//27773535//22608085
chr1:247200831-247200832(-) m6A CDS       24981863//27773535//22608085
chr1:247200848-247200849(-) m6A CDS       24981863//27773535//22608085
chr1:247200915-247200916(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr1:247200932-247200933(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr1:247200984-247200985(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:247201016-247201017(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:247201083-247201084(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:247201167-247201168(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:247201251-247201252(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr1:247201268-247201269(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:247201278-247201279(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:247201320-247201321(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:247201334-247201335(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:247201446-247201447(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:247201488-247201489(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr1:247201533-247201534(-) m6A CDS       24981863
chr1:247201537-247201538(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr1:247201673-247201674(-) m6A CDS       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF670
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B2-3p
Interactor2: ZNF670

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

Starting a new search, please wait ...