Basic Information:

  VIRBase ID:  

VHID00540325

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:  MIMAT0031763          TOMM40L:  NM_001286374     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2-3p	TOMM40L
miRBase Accession/Entrez ID	MIMAT0031763	84134
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	TOMM40B

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TOMM40L	chr1:161196156-161196157(+) m6A 5'UTR//exon//intron       24284625//24981863 chr1:161198290-161198291(+) m6A CDS//exon       24981863 chr1:161198299-161198300(+) m6A exon//intron       24981863 chr1:161198918-161198919(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:161198948-161198949(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:161198992-161198993(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:161199012-161199013(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:161199017-161199018(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:161199034-161199035(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:161199134-161199135(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:161199714-161199715(+) m6A 3'UTR//exon       24981863 chr1:161199747-161199748(+) m6A 3'UTR//exon       24981863//22608085 chr1:161199801-161199802(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr1:161199828-161199829(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr1:161199860-161199861(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr1:161199938-161199939(+) m6A 3'UTR//exon       24284625//25456834//22608085 chr1:161199977-161199978(+) m6A 3'UTR//exon       24284625//25456834//22608085 chr1:161199988-161199989(+) m6A 3'UTR//exon       24284625//25456834//22608085 chr1:161200083-161200084(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:161200108-161200109(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:161200148-161200149(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:161200156-161200157(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:161200163-161200164(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:161200181-161200182(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:161200294-161200295(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr1:161200407-161200408(+) m6A 3'UTR       - chr1:161200453-161200454(+) m6A 3'UTR       - chr1:161200475-161200476(+) m6A 3'UTR       - chr1:161200480-161200481(+) m6A 3'UTR       - chr1:161200512-161200513(+) m6A 3'UTR       - chr1:161200523-161200524(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TOMM40L	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2-3p
Interactor2: TOMM40L

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg