Basic Information:

  VIRBase ID:  

VHID00540320

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:  MIMAT0031763          OBSCN:  NM_001271223     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2-3p	OBSCN
miRBase Accession/Entrez ID	MIMAT0031763	84033
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARHGEF30//UNC89

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	OBSCN	chr1:228412194(+) A-I      Syn:Ala->Ala chr1:228445960(+) A-I      intronic chr1:228445956(+) A-I      intronic chr1:228445930(+) A-I      intronic chr1:228425526(+) A-I      intronic chr1:228425461(+) A-I      intronic chr1:228425521(+) A-I      intronic chr1:228425517(+) A-I      intronic chr1:228445777(+) A-I      intronic chr1:228438938(+) A-I      intronic chr1:228438928(+) A-I      intronic chr1:228438912(+) A-I      intronic chr1:228438890(+) A-I      intronic chr1:228438875(+) A-I      intronic chr1:228425478(+) A-I      intronic chr1:228454866(+) A-I      intronic chr1:228446024(+) A-I      intronic chr1:228445920(+) A-I      intronic chr1:228445583(+) A-I      intronic chr1:228445982(+) A-I      intronic chr1:228445976(+) A-I      intronic chr1:228445969(+) A-I      intronic chr1:228427808(+) A-I      intronic chr1:228427848(+) A-I      intronic chr1:228417396(+) A-I      intronic chr1:228417412(+) A-I      intronic chr1:228417024(+) A-I      intronic chr1:228453628(+) A-I      intronic chr1:228454853(+) A-I      intronic chr1:228445905(+) A-I      intronic chr1:228546372(+) A-I      intronic chr1:228417457(+) A-I      intronic chr1:228427746(+) A-I      intronic chr1:228416990(+) A-I      intronic chr1:228416992(+) A-I      intronic chr1:228454888(+) A-I      intronic chr1:228454834(+) A-I      intronic chr1:228445946(+) A-I      intronic chr1:228453612(+) A-I      intronic chr1:228453609(+) A-I      intronic chr1:228453615(+) A-I      intronic chr1:228445561(+) A-I      intronic chr1:228449153(+) A-I      intronic chr1:228445502(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	OBSCN	chr1:228453615(+) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	OBSCN	chr1:228400046-228400047(+) m6A CDS       22575960 chr1:228400088-228400089(+) m6A CDS       22575960 chr1:228400103-228400104(+) m6A CDS       22575960 chr1:228400123-228400124(+) m6A CDS       22575960 chr1:228400361-228400362(+) m6A CDS       24284625 chr1:228400397-228400398(+) m6A CDS       24284625 chr1:228400441-228400442(+) m6A CDS       24284625//27371828 chr1:228403187-228403188(+) Gm intron       - chr1:228404737-228404738(+) m6A CDS//exon       24284625 chr1:228404796-228404797(+) m6A CDS//exon       24284625 chr1:228404959-228404960(+) m6A CDS//exon       24284625 chr1:228404968-228404969(+) m6A CDS//exon       24284625//25456834 chr1:228405508-228405509(+) Cm intron       - chr1:228407120-228407121(+) m6A CDS//intron       24284625 chr1:228407155-228407156(+) m1A CDS//intron       26863196 chr1:228407237-228407238(+) m6A CDS//intron       24284625//24209618 chr1:228407268-228407269(+) m6A CDS//intron       24284625 chr1:228412290-228412291(+) m1A CDS       26863196 chr1:228430907-228430908(+) m6A CDS       - chr1:228431014-228431015(+) m1A CDS       26863196 chr1:228431092-228431093(+) m6A CDS       24284625//24209618//22575960 chr1:228431105-228431106(+) m6A CDS       24284625//24209618//22575960 chr1:228432127-228432128(+) m1A CDS       26863196 chr1:228433175-228433176(+) m6A CDS       24284625 chr1:228433214-228433215(+) m6A CDS       24284625//22575960 chr1:228433244-228433245(+) m1A CDS       26863196 chr1:228434278-228434279(+) m6A CDS       24284625//22575960 chr1:228434329-228434330(+) m6A CDS       24284625//22575960 chr1:228437766-228437767(+) m6A CDS       25456834 chr1:228437796-228437797(+) m1A CDS       26863196 chr1:228437878-228437879(+) m6A CDS       24284625//25456834 chr1:228444482-228444483(+) m1A CDS       26863196 chr1:228451878-228451879(+) m6A CDS       24284625//25456834 chr1:228451917-228451918(+) m6A CDS       24284625//25456834 chr1:228451949-228451950(+) m6A CDS       24284625//25456834 chr1:228456331-228456332(+) m6A CDS       24284625 chr1:228456361-228456362(+) m1A CDS       26863196 chr1:228459708-228459709(+) m6A CDS//intron       24284625//22575960 chr1:228459777-228459778(+) m1A CDS//intron       26863196 chr1:228461103-228461104(+) m1A CDS//intron       26863196 chr1:228461686-228461687(+) m6A CDS       27371828 chr1:228461728-228461729(+) m6A CDS       27371828 chr1:228462464-228462465(+) m6A CDS       27371828 chr1:228463567-228463568(+) m6A CDS       27371828 chr1:228463702-228463703(+) m6A CDS       22575960 chr1:228463713-228463714(+) m6A CDS       22575960 chr1:228467069-228467070(+) m6A CDS       24284625 chr1:228470751-228470752(+) m6A CDS//exon       24284625 chr1:228470832-228470833(+) m6A CDS//exon       24284625 chr1:228473988-228473989(+) m6A CDS       24284625 chr1:228474530-228474531(+) m6A CDS       24284625//22575960 chr1:228474550-228474551(+) m6A CDS       24284625//25456834//22575960 chr1:228474580-228474581(+) m6A CDS       24284625//25456834//24981863 chr1:228474595-228474596(+) m6A CDS       24284625//25456834//24981863 chr1:228474677-228474678(+) m6A CDS       24284625//25456834 chr1:228475427-228475428(+) m6A CDS       24284625 chr1:228475511-228475512(+) m6A CDS       24284625 chr1:228475583-228475584(+) m6A CDS       24284625 chr1:228475598-228475599(+) m6A CDS       24284625 chr1:228475628-228475629(+) m6A CDS       24284625 chr1:228475633-228475634(+) m6A CDS       24284625 chr1:228475786-228475787(+) m6A CDS       24284625 chr1:228475794-228475795(+) m6A CDS       24284625 chr1:228475880-228475881(+) m6A CDS       24284625//25456834 chr1:228475896-228475897(+) m6A CDS       24284625//25456834 chr1:228476000-228476001(+) m6A CDS       24284625 chr1:228476350-228476351(+) m6A CDS       24284625 chr1:228476356-228476357(+) m6A CDS       24284625 chr1:228476460-228476461(+) m6A CDS       24284625//25456834 chr1:228476564-228476565(+) m6A CDS       24284625//25456834 chr1:228479674-228479675(+) m6A CDS       24284625//25456834//22575960 chr1:228479718-228479719(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:228479733-228479734(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:228479759-228479760(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:228479837-228479838(+) m6A CDS       24284625//25456834//22575960//22608085 chr1:228480256-228480257(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:228480304-228480305(+) m6A CDS       24284625//25456834//22575960//22608085 chr1:228480342-228480343(+) m6A CDS       24284625//25456834//22575960//22608085 chr1:228480358-228480359(+) m6A CDS       24284625//25456834//22575960//22608085 chr1:228480384-228480385(+) m6A CDS       24284625//25456834//22575960 chr1:228480424-228480425(+) m6A CDS       24284625//25456834//24981863//22575960 chr1:228480462-228480463(+) m6A CDS       24284625//25456834//24981863//22575960 chr1:228481172-228481173(+) m6A CDS       24284625//25456834//22575960 chr1:228481188-228481189(+) m6A CDS       24284625//25456834//22575960 chr1:228481292-228481293(+) m6A CDS       24284625//25456834//22575960 chr1:228481906-228481907(+) m6A CDS//exon       24284625//25456834//22575960 chr1:228481971-228481972(+) m6A CDS//exon       24284625//25456834//22575960 chr1:228481987-228481988(+) m6A CDS//exon       24284625 chr1:228482091-228482092(+) m6A CDS//exon       24284625 chr1:228482513-228482514(+) m6A CDS//exon       24284625 chr1:228482599-228482600(+) m6A CDS//exon       24284625//24981863 chr1:228482615-228482616(+) m6A CDS//exon       24284625//24981863 chr1:228482641-228482642(+) m6A CDS//exon       24284625//25456834 chr1:228482681-228482682(+) m6A CDS//exon       24284625//25456834//22575960 chr1:228482719-228482720(+) m6A CDS//exon       24284625//25456834//22575960 chr1:228482750-228482751(+) m6A exon//intron       24284625//22575960 chr1:228486186-228486187(+) m6A CDS//intron       24284625 chr1:228486273-228486274(+) m6A CDS//intron       24284625 chr1:228486383-228486384(+) m6A CDS//intron       24284625 chr1:228486393-228486394(+) m6A CDS//intron       24284625 chr1:228487094-228487095(+) m6A CDS//intron       24284625 chr1:228487110-228487111(+) m6A CDS//intron       24284625 chr1:228487717-228487718(+) m6A CDS//exon//intron       24284625 chr1:228487743-228487744(+) m6A CDS//exon//intron       24284625 chr1:228488031-228488032(+) m6A exon//intron       - chr1:228488070-228488071(+) m6A exon//intron       - chr1:228488853-228488854(+) m6A exon//intron       - chr1:228488886-228488887(+) m6A exon//intron       - chr1:228488901-228488902(+) m6A exon//intron       - chr1:228488921-228488922(+) m6A exon//intron       - chr1:228491494-228491495(+) m6A CDS//exon//intron       24284625 chr1:228491510-228491511(+) m6A CDS//exon//intron       24284625 chr1:228491576-228491577(+) m6A CDS//exon//intron       24284625 chr1:228491614-228491615(+) m6A CDS//exon//intron       24284625 chr1:228492024-228492025(+) m6A CDS//exon//intron       24284625//25456834//22575960//22608085 chr1:228492036-228492037(+) m6A CDS//exon//intron       24284625//25456834//22575960//22608085 chr1:228492079-228492080(+) m6A CDS//intron       24284625//25456834//22575960//22608085 chr1:228492115-228492116(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr1:228492122-228492123(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr1:228492138-228492139(+) m6A CDS//intron       24284625//25456834//24981863//22575960 chr1:228492164-228492165(+) m6A CDS//intron       24284625//25456834//24981863//22575960 chr1:228492242-228492243(+) m6A CDS//intron       24284625 chr1:228492935-228492936(+) m6A CDS//intron       24284625 chr1:228492942-228492943(+) m6A CDS//intron       24284625 chr1:228492958-228492959(+) m6A CDS//intron       24284625 chr1:228492984-228492985(+) m6A CDS//intron       24284625 chr1:228493024-228493025(+) m6A CDS//intron       24284625 chr1:228494979-228494980(+) m6A CDS//intron       24284625//22575960 chr1:228495006-228495007(+) m6A CDS//intron       24284625//22575960 chr1:228495169-228495170(+) m6A CDS//intron       24284625 chr1:228497205-228497206(+) m6A CDS//intron       - chr1:228503553-228503554(+) m6A CDS//intron       - chr1:228503668-228503669(+) m6A CDS//intron       - chr1:228506719-228506720(+) m6A CDS//intron       24284625 chr1:228509123-228509124(+) m6A CDS//intron       24284625 chr1:228509138-228509139(+) m6A CDS//intron       24284625 chr1:228509159-228509160(+) m6A CDS//intron       24284625 chr1:228509258-228509259(+) m6A CDS//intron       24284625//25456834//24981863 chr1:228509426-228509427(+) m6A CDS//intron       24284625//25456834//22575960 chr1:228509681-228509682(+) m6A CDS//intron       24284625//25456834//24981863//22575960 chr1:228509689-228509690(+) m6A CDS//intron       24284625//25456834//24981863//22575960 chr1:228509817-228509818(+) m6A CDS//intron       24284625//25456834//24981863//22575960 chr1:228509857-228509858(+) m6A CDS//intron       24284625//24981863 chr1:228511232-228511233(+) m6A CDS//intron       24284625 chr1:228511262-228511263(+) m6A CDS//intron       24284625 chr1:228529210-228529211(+) m6A CDS//intron       - chr1:228529242-228529243(+) m6A CDS//intron       - chr1:228547304-228547305(+) m6A 3'UTR//CDS//intron       24284625 chr1:228547471-228547472(+) m6A 3'UTR//CDS//intron       24284625 chr1:228547543-228547544(+) m6A 3'UTR//CDS//intron       24284625//25456834 chr1:228547583-228547584(+) m6A 3'UTR//CDS//intron       24284625//25456834 chr1:228547698-228547699(+) m6A 3'UTR//CDS//intron       24284625//25456834 chr1:228547818-228547819(+) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//22608085 chr1:228547926-228547927(+) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//22575960//22608085 chr1:228548027-228548028(+) m6A 3'UTR//CDS//intron       24284625//25456834//22575960 chr1:228548215-228548216(+) m6A 3'UTR//CDS//intron       24284625 chr1:228548331-228548332(+) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//22575960//22608085 chr1:228548372-228548373(+) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//22575960//22608085 chr1:228548387-228548388(+) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//22575960//22608085 chr1:228548424-228548425(+) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//22575960//22608085 chr1:228548613-228548614(+) m6A 3'UTR//intron       24284625//25456834//24981863//22575960 chr1:228548653-228548654(+) m6A 3'UTR//intron       24284625//25456834//24981863//22575960 chr1:228548699-228548700(+) m6A 3'UTR//intron       24284625//25456834//24981863//22575960 chr1:228548829-228548830(+) m6A 3'UTR//intron       24284625//25456834//24981863//22575960 chr1:228548886-228548887(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr1:228553212-228553213(+) m6A CDS       - chr1:228553224-228553225(+) m6A CDS       - chr1:228558832-228558833(+) m6A CDS       24284625 chr1:228559311-228559312(+) m6A CDS       24284625//25456834//24981863 chr1:228559373-228559374(+) m6A CDS       24284625//25456834//24981863 chr1:228559468-228559469(+) m6A CDS       24284625//25456834 chr1:228559552-228559553(+) m6A CDS       24284625//25456834 chr1:228559715-228559716(+) m6A CDS       24284625 chr1:228559762-228559763(+) m6A CDS       24284625//24981863 chr1:228559783-228559784(+) m6A CDS       24284625//24981863 chr1:228559808-228559809(+) m6A CDS       27773536 chr1:228559932-228559933(+) m6A CDS       24284625//27371828//27773536 chr1:228559988-228559989(+) m6A CDS       24284625//27371828 chr1:228560296-228560297(+) m6A CDS       24284625 chr1:228560329-228560330(+) m6A CDS       24284625 chr1:228560371-228560372(+) m6A CDS       24284625 chr1:228560386-228560387(+) m6A CDS       24284625 chr1:228560410-228560411(+) m6A CDS       - chr1:228560552-228560553(+) m6A CDS       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	OBSCN	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2-3p
Interactor2: OBSCN

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg