Detail Information

Basic Information:


  VIRBase ID:  

VHID00540282

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:           ABHD11:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B2-3p ABHD11
miRBase
Accession/Entrez ID		 MIMAT0031763 83451
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - PP1226//WBSCR21

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ABHD11
chr7:73150632(-) A-I      3'UTR
chr7:73150645(-) A-I      3'UTR
chr7:73150655(-) A-I      3'UTR
chr7:73150734(-) A-I      3'UTR
chr7:73150749(-) A-I      3'UTR
chr7:73150773(-) A-I      3'UTR
chr7:73150842(-) A-I      3'UTR
chr7:73150843(-) A-I      3'UTR
chr7:73150612(-) A-I      3'UTR
chr7:73150707(-) A-I      3'UTR
chr7:73150603(-) A-I      3'UTR
chr7:73150624(-) A-I      3'UTR
chr7:73150600(-) A-I      3'UTR
chr7:73150708(-) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ABHD11
chr7:73150436-73150437(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr7:73150459-73150460(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:73150500-73150501(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:73150506-73150507(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:73150556-73150557(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:73150574-73150575(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:73150579-73150580(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:73150596-73150597(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:73150665-73150666(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr7:73150762-73150763(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22608085
chr7:73150785-73150786(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085
chr7:73150922-73150923(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863
chr7:73151198-73151199(-) m6A exon//intron       24284625
chr7:73151342-73151343(-) m6A 3'UTR//CDS//exon//intron       24284625
chr7:73151369-73151370(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834
chr7:73151438-73151439(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834
chr7:73151467-73151468(-) m6A CDS//intron       24284625//25456834
chr7:73151479-73151480(-) m6A CDS//intron       24284625//25456834
chr7:73151508-73151509(-) m6A CDS//intron       24284625//25456834
chr7:73151514-73151515(-) m6A CDS//intron       24284625//25456834
chr7:73151571-73151572(-) m6A 3'UTR//CDS//exon//intron       24284625
chr7:73151583-73151584(-) m6A 3'UTR//CDS//exon//intron       24284625
chr7:73151749-73151750(-) m6A exon//intron       24284625
chr7:73151769-73151770(-) m6A exon//intron       24284625
chr7:73151821-73151822(-) m6A exon//intron       -
chr7:73153058-73153059(-) m6A CDS//exon       25456834//24981863//27371828
chr7:73153087-73153088(-) m6A CDS//exon       25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ABHD11
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B2-3p
Interactor2: ABHD11

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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