Detail Information

Basic Information:


  VIRBase ID:  

VHID00539676

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:           ALKBH4:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B2-3p ALKBH4
miRBase
Accession/Entrez ID		 MIMAT0031763 54784
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - ABH4

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ALKBH4
chr7:102102083(-) A-I      intronic
chr7:102104381(-) A-I      intronic
chr7:102104366(-) A-I      intronic
chr7:102104355(-) A-I      intronic
chr7:102101991(-) A-I      intronic
chr7:102101592(-) A-I      intronic
chr7:102100501(-) A-I      intronic
chr7:102099342(-) A-I      intronic
chr7:102104428(-) A-I      intronic
chr7:102100421(-) A-I      intronic
chr7:102100389(-) A-I      intronic
chr7:102100479(-) A-I      intronic
chr7:102104388(-) A-I      intronic
chr7:102102005(-) A-I      intronic
chr7:102101527(-) A-I      intronic
chr7:102100703(-) A-I      intronic
chr7:102103061(-) A-I      intronic
chr7:102101539(-) A-I      intronic
chr7:102101743(-) A-I      intronic
chr7:102103014(-) A-I      intronic
chr7:102103569(-) A-I      intronic
chr7:102099541(-) A-I      intronic
chr7:102100344(-) A-I      intronic
chr7:102097455(-) A-I      3'UTR
chr7:102097443(-) A-I      3'UTR
chr7:102097445(-) A-I      3'UTR
chr7:102097440(-) A-I      3'UTR
chr7:102097392(-) A-I      3'UTR
chr7:102097414(-) A-I      3'UTR
chr7:102097444(-) A-I      3'UTR
chr7:102097542(-) A-I      3'UTR
chr7:102098678(-) A-I      intronic
chr7:102100731(-) A-I      intronic
chr7:102101627(-) A-I      intronic
chr7:102102082(-) A-I      intronic
chr7:102101972(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ALKBH4
chr7:102097392(-) A-G exon 3'UTR    22484847
chr7:102097443(-) A-G exon 3'UTR    22484847
chr7:102097454(-) A-G exon 3'UTR    22484847
chr7:102097455(-) A-G exon 3'UTR    22484847
chr7:102097458(-) A-G exon 3'UTR    22484847
chr7:102097542(-) A-G exon 3'UTR    22484847
chr7:102101527(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ALKBH4
chr7:102096868-102096869(-) m6A 3'UTR       27773535
chr7:102096893-102096894(-) m6A 3'UTR       27773535
chr7:102097131-102097132(-) m6A 3'UTR       27773535
chr7:102097146-102097147(-) m6A 3'UTR       27773535
chr7:102097171-102097172(-) m6A 3'UTR       27773535
chr7:102097274-102097275(-) m6A 3'UTR       24981863//27773535//22608085
chr7:102097302-102097303(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr7:102097371-102097372(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr7:102097451-102097452(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr7:102097467-102097468(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr7:102097491-102097492(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr7:102097607-102097608(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr7:102097654-102097655(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:102097783-102097784(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr7:102097820-102097821(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr7:102097839-102097840(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr7:102097849-102097850(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr7:102097882-102097883(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr7:102097972-102097973(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr7:102098102-102098103(-) m6A 3'UTR//CDS       24284625//24209618//27371828//27773536
chr7:102098279-102098280(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr7:102098385-102098386(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr7:102098398-102098399(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr7:102099896-102099897(-) m6A exon//intron       24284625//27371828
chr7:102099919-102099920(-) m6A exon//intron       24284625//27371828
chr7:102100045-102100046(-) m6A exon//intron       24284625
chr7:102100093-102100094(-) m6A 3'UTR//CDS//exon       24284625
chr7:102100138-102100139(-) m6A 3'UTR//CDS//exon       24284625
chr7:102100244-102100245(-) m6A CDS//exon//intron       24284625//27773536
chr7:102105219-102105220(-) m6A CDS//exon       24284625//27773536
chr7:102105261-102105262(-) m6A CDS//exon       24284625//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ALKBH4
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B2-3p
Interactor2: ALKBH4

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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