Basic Information:

  VIRBase ID:  

VHID00538459

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:  MIMAT0031763          QSOX1:  NM_002826     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2-3p	QSOX1
miRBase Accession/Entrez ID	MIMAT0031763	5768
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Q6//QSCN6

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	QSOX1	chr1:180172151(+) A-I      3'UTR chr1:180141741(+) A-I      intronic chr1:180172085(+) A-I      3'UTR chr1:180147639(+) A-I      intronic chr1:180172026(+) A-I      3'UTR chr1:180142306(+) A-I      intronic chr1:180144145(+) A-I      intronic chr1:180144237(+) A-I      intronic chr1:180144033(+) A-I      intronic chr1:180147563(+) A-I      intronic chr1:180141793(+) A-I      intronic chr1:180144099(+) A-I      intronic chr1:180172086(+) A-I      3'UTR chr1:180172025(+) A-I      3'UTR chr1:180143095(+) A-I      intronic chr1:180172115(+) A-I      3'UTR chr1:180171959(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	QSOX1	chr1:180123994-180123995(+) m6A 5'UTR       25456834//24981863 chr1:180124184-180124185(+) m6A CDS       - chr1:180145085-180145086(+) m6A CDS//intron       22575960 chr1:180151318-180151319(+) m6A 3'UTR//CDS       24284625 chr1:180151360-180151361(+) m6A 3'UTR//CDS       24284625 chr1:180163410-180163411(+) m6A CDS       24284625 chr1:180165411-180165412(+) m6A CDS       24284625//22575960 chr1:180165448-180165449(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960 chr1:180165555-180165556(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:180165663-180165664(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:180165699-180165700(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:180165727-180165728(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:180165864-180165865(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:180165906-180165907(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:180166053-180166054(+) m6A CDS//intron       24284625//24209618//25456834//24981863 chr1:180166172-180166173(+) m6A 3'UTR//intron       24284625//24209618//24981863 chr1:180166586-180166587(+) m6A 3'UTR       24284625//25456834//24981863//22575960 chr1:180166632-180166633(+) m6A 3'UTR       24284625//25456834//24981863//22575960 chr1:180166666-180166667(+) m6A 3'UTR       24284625//25456834//24981863//22575960 chr1:180166710-180166711(+) m6A 3'UTR       24284625//25456834//24981863//22575960 chr1:180166830-180166831(+) m6A 3'UTR       24284625 chr1:180168585-180168586(+) m6A 3'UTR       24981863 chr1:180168602-180168603(+) m6A 3'UTR       24981863 chr1:180168720-180168721(+) m6A 3'UTR       24981863 chr1:180168771-180168772(+) m6A 3'UTR       24209618 chr1:180168783-180168784(+) m6A 3'UTR       24209618 chr1:180168832-180168833(+) m6A 3'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	QSOX1	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2-3p
Interactor2: QSOX1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg