Basic Information:

  VIRBase ID:  

VHID00538154

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2-3p:  MIMAT0031763          IDH1:  NM_001282387     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2-3p	IDH1
miRBase Accession/Entrez ID	MIMAT0031763	3417
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HEL-216//HEL-S-26//IDCD//IDH//IDP//IDPC//PICD

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IDH1	chr2:209111584(-) A-I      intronic chr2:209112243(-) A-I      intronic chr2:209102993(-) A-I      intronic chr2:209102965(-) A-I      intronic chr2:209102964(-) A-I      intronic chr2:209102400(-) A-I      intronic chr2:209102949(-) A-I      intronic chr2:209102463(-) A-I      intronic chr2:209102401(-) A-I      intronic chr2:209111555(-) A-I      intronic chr2:209102639(-) A-I      intronic chr2:209102832(-) A-I      intronic chr2:209102954(-) A-I      intronic chr2:209111659(-) A-I      intronic chr2:209102924(-) A-I      intronic chr2:209112455(-) A-I      intronic chr2:209102542(-) A-I      intronic chr2:209102567(-) A-I      intronic chr2:209112515(-) A-I      intronic chr2:209112175(-) A-I      intronic chr2:209102782(-) A-I      intronic chr2:209102563(-) A-I      intronic chr2:209111487(-) A-I      intronic chr2:209112300(-) A-I      intronic chr2:209112427(-) A-I      intronic chr2:209111543(-) A-I      intronic chr2:209102641(-) A-I      intronic chr2:209102455(-) A-I      intronic chr2:209112258(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	IDH1	chr2:209108900(-) A-I intron -    21960545 chr2:209102477(-) A-G intron -    22484847 chr2:209111487(-) A-G intron -    22484847 chr2:209112238(-) A-G intron -    22484847 chr2:209112298(-) A-G intron -    22484847 chr2:209112300(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IDH1	chr2:209118641-209118642(-) m6A 5'UTR//exon       24981863//27773535 chr2:209118651-209118652(-) m6A 5'UTR//exon       24981863//27773535 chr2:209118675-209118676(-) m6A 5'UTR//exon       24981863//27773535 chr2:209118744-209118745(-) m6A 5'UTR//intron       24981863//27773535 chr2:209118770-209118771(-) m6A 5'UTR//intron       24981863//27773535 chr2:209118779-209118780(-) m6A 5'UTR//intron       24981863//27773535 chr2:209118920-209118921(-) m6A 5'UTR//intron       24981863 chr2:209118928-209118929(-) m6A 5'UTR//intron       24981863 chr2:209118936-209118937(-) m6A 5'UTR//intron       24981863 chr2:209119019-209119020(-) m6A 5'UTR//intron       24981863 chr2:209119811-209119812(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27371828 chr2:209119838-209119839(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IDH1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2-3p
Interactor2: IDH1

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg