Basic Information:

  VIRBase ID:  

VHID00536392

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B20-3p:  MIMAT0031158          RSRC2:  NR_036434     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B20-3p	RSRC2
miRBase Accession/Entrez ID	MIMAT0031158	65117
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RSRC2	chr12:122993753(-) A-I      intronic chr12:122992569(-) A-I      intronic chr12:122991721(-) A-I      intronic chr12:122992554(-) A-I      intronic chr12:122993730(-) A-I      intronic chr12:122993937(-) A-I      intronic chr12:122997523(-) A-I      intronic chr12:122993739(-) A-I      intronic chr12:122996525(-) A-I      intronic chr12:122996530(-) A-I      intronic chr12:122996644(-) A-I      intronic chr12:122993751(-) A-I      intronic chr12:122998537(-) A-I      intronic chr12:122997016(-) A-I      intronic chr12:122997058(-) A-I      intronic chr12:122993752(-) A-I      intronic chr12:122992533(-) A-I      intronic chr12:122992570(-) A-I      intronic chr12:122991768(-) A-I      intronic chr12:122998423(-) A-I      ncRNA chr12:122998440(-) A-I      ncRNA chr12:122997510(-) A-I      intronic chr12:122997655(-) A-I      intronic chr12:122998569(-) A-I      intronic chr12:122998849(-) A-I      intronic chr12:122998897(-) A-I      intronic chr12:122998904(-) A-I      intronic chr12:122998923(-) A-I      intronic chr12:122998927(-) A-I      intronic chr12:122998944(-) A-I      intronic chr12:122999000(-) A-I      intronic chr12:122999092(-) A-I      intronic chr12:123001458(-) A-I      intronic chr12:122994562(-) A-I      intronic chr12:122990398(-) A-I      intronic chr12:122990402(-) A-I      intronic chr12:122990418(-) A-I      intronic chr12:122990519(-) A-I      intronic chr12:122990607(-) A-I      intronic chr12:122990728(-) A-I      intronic chr12:122991071(-) A-I      intronic chr12:122991755(-) A-I      intronic chr12:122991847(-) A-I      intronic chr12:122991853(-) A-I      intronic chr12:122991907(-) A-I      intronic chr12:122992518(-) A-I      intronic chr12:122994438(-) A-I      intronic chr12:122994448(-) A-I      intronic chr12:122994536(-) A-I      intronic chr12:122994537(-) A-I      intronic chr12:122994557(-) A-I      intronic chr12:122994565(-) A-I      intronic chr12:122994596(-) A-I      intronic chr12:122994636(-) A-I      intronic chr12:122994650(-) A-I      intronic chr12:122994928(-) A-I      intronic chr12:122996367(-) A-I      intronic chr12:122996430(-) A-I      intronic chr12:122996446(-) A-I      intronic chr12:122996465(-) A-I      intronic chr12:122996492(-) A-I      intronic chr12:122996524(-) A-I      intronic chr12:122996603(-) A-I      intronic chr12:122997095(-) A-I      intronic chr12:122997167(-) A-I      intronic chr12:122997170(-) A-I      intronic chr12:122997179(-) A-I      intronic chr12:122997477(-) A-I      intronic chr12:122997483(-) A-I      intronic chr12:122997497(-) A-I      intronic chr12:122991121(-) A-I      intronic chr12:123000436(-) A-I      intronic chr12:122992578(-) A-I      intronic chr12:122997090(-) A-I      intronic chr12:122994396(-) A-I      intronic chr12:122996559(-) A-I      intronic chr12:122994529(-) A-I      intronic chr12:122997130(-) A-I      intronic chr12:122992596(-) A-I      intronic chr12:122993459(-) A-I      intronic chr12:122997115(-) A-I      intronic chr12:122997157(-) A-I      intronic chr12:122993814(-) A-I      intronic chr12:122996542(-) A-I      intronic chr12:122991081(-) A-I      intronic chr12:122996450(-) A-I      intronic chr12:122997519(-) A-I      intronic chr12:122991681(-) A-I      intronic chr12:122990736(-) A-I      intronic chr12:122991949(-) A-I      intronic chr12:122997082(-) A-I      intronic chr12:123001433(-) A-I      intronic chr12:122992347(-) A-I      intronic chr12:122993983(-) A-I      intronic chr12:122997575(-) A-I      intronic chr12:122994897(-) A-I      intronic chr12:122996604(-) A-I      intronic chr12:123001485(-) A-I      intronic chr12:122992485(-) A-I      intronic chr12:122990614(-) A-I      intronic chr12:122998470(-) A-I      intronic chr12:122994619(-) A-I      intronic chr12:122991842(-) A-I      intronic chr12:122998522(-) A-I      intronic chr12:122999085(-) A-I      intronic chr12:122997217(-) A-I      intronic chr12:122992588(-) A-I      intronic chr12:122996518(-) A-I      intronic chr12:122998884(-) A-I      intronic chr12:122997121(-) A-I      intronic chr12:122990621(-) A-I      intronic chr12:123001522(-) A-I      intronic chr12:122997602(-) A-I      intronic chr12:122992547(-) A-I      intronic chr12:122997489(-) A-I      intronic chr12:123007962(-) A-I      intronic chr12:123001337(-) A-I      intronic chr12:122999086(-) A-I      intronic chr12:122996527(-) A-I      intronic chr12:122991759(-) A-I      intronic chr12:122993961(-) A-I      intronic chr12:122991728(-) A-I      intronic chr12:122997196(-) A-I      intronic chr12:122996532(-) A-I      intronic chr12:122996469(-) A-I      intronic chr12:122997021(-) A-I      intronic chr12:122990689(-) A-I      intronic chr12:122991922(-) A-I      intronic chr12:122999050(-) A-I      intronic chr12:122994471(-) A-I      intronic chr12:122997547(-) A-I      intronic chr12:122998479(-) A-I      intronic chr12:122991745(-) A-I      intronic chr12:122990423(-) A-I      intronic chr12:122994533(-) A-I      intronic chr12:123000371(-) A-I      intronic chr12:123000388(-) A-I      intronic chr12:122992601(-) A-I      intronic chr12:122991924(-) A-I      intronic chr12:122998567(-) A-I      intronic chr12:122997045(-) A-I      intronic chr12:122997063(-) A-I      intronic chr12:122992515(-) A-I      intronic chr12:122998908(-) A-I      intronic chr12:122994620(-) A-I      intronic chr12:122997197(-) A-I      intronic chr12:123000367(-) A-I      intronic chr12:122996625(-) A-I      intronic chr12:122992600(-) A-I      intronic chr12:122997576(-) A-I      intronic chr12:122994933(-) A-I      intronic chr12:122996547(-) A-I      intronic chr12:122997227(-) A-I      intronic chr12:122996558(-) A-I      intronic chr12:122996531(-) A-I      intronic chr12:122998484(-) A-I      intronic chr12:122992397(-) A-I      intronic chr12:123000412(-) A-I      intronic chr12:123001307(-) A-I      intronic chr12:122992622(-) A-I      intronic chr12:122996510(-) A-I      intronic chr12:122992583(-) A-I      intronic chr12:122997573(-) A-I      intronic chr12:122990424(-) A-I      intronic chr12:122991804(-) A-I      intronic chr12:122997216(-) A-I      intronic chr12:122994546(-) A-I      intronic chr12:122992422(-) A-I      intronic chr12:123000530(-) A-I      intronic chr12:122995544(-) A-I      intronic chr12:123001459(-) A-I      intronic chr12:122992546(-) A-I      intronic chr12:122991778(-) A-I      intronic chr12:122996626(-) A-I      intronic chr12:122997040(-) A-I      intronic chr12:122998994(-) A-I      intronic chr12:123001325(-) A-I      intronic chr12:122995057(-) A-I      intronic chr12:122997112(-) A-I      intronic chr12:122998571(-) A-I      intronic chr12:122992486(-) A-I      intronic chr12:123001422(-) A-I      intronic chr12:122996549(-) A-I      intronic chr12:122998885(-) A-I      intronic chr12:122998493(-) A-I      intronic chr12:122994887(-) A-I      intronic chr12:122992564(-) A-I      intronic chr12:122991802(-) A-I      intronic chr12:122998496(-) A-I      intronic chr12:122995024(-) A-I      intronic chr12:122996529(-) A-I      intronic chr12:122996370(-) A-I      intronic chr12:122996422(-) A-I      intronic chr12:122994641(-) A-I      intronic chr12:122996590(-) A-I      intronic chr12:122992330(-) A-I      intronic chr12:122990616(-) A-I      intronic chr12:122997049(-) A-I      intronic chr12:122992346(-) A-I      intronic chr12:122998909(-) A-I      intronic chr12:122994509(-) A-I      intronic chr12:122993802(-) A-I      intronic chr12:123000532(-) A-I      intronic chr12:122991843(-) A-I      intronic chr12:122992517(-) A-I      intronic chr12:122997155(-) A-I      intronic chr12:123000528(-) A-I      intronic chr12:123001302(-) A-I      intronic chr12:122991713(-) A-I      intronic chr12:122996620(-) A-I      intronic chr12:122992335(-) A-I      intronic chr12:122990428(-) A-I      intronic chr12:122992529(-) A-I      intronic chr12:122997098(-) A-I      intronic chr12:122997131(-) A-I      intronic chr12:123000047(-) A-I      intronic chr12:122996451(-) A-I      intronic chr12:122992512(-) A-I      intronic chr12:122996421(-) A-I      intronic chr12:122993873(-) A-I      intronic chr12:122997272(-) A-I      intronic chr12:122997162(-) A-I      intronic chr12:123001380(-) A-I      intronic chr12:122998471(-) A-I      intronic chr12:122996491(-) A-I      intronic chr12:122998950(-) A-I      intronic chr12:122991846(-) A-I      intronic chr12:123000025(-) A-I      intronic chr12:122997660(-) A-I      intronic chr12:122996533(-) A-I      intronic chr12:122994642(-) A-I      intronic chr12:123001342(-) A-I      intronic chr12:122997620(-) A-I      intronic chr12:122996588(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RSRC2	chr12:122992486(-) A-I intron -    15258596 chr12:122992600(-) A-I intron -    15258596 chr12:122992622(-) A-I intron -    15258596 chr12:122993873(-) A-I intron -    22327324 chr12:122996510(-) A-I intron -    22327324 chr12:122996518(-) A-I intron -    22327324 chr12:122996527(-) A-I intron -    22327324 chr12:122997049(-) A-I intron -    22327324 chr12:122997227(-) A-I intron -    22327324 chr12:122998571(-) A-I intron -    21960545   //22327324 chr12:122998908(-) A-I intron -    22327324 chr12:122997121(-) A-I intron -    21960545 chr12:122990614(-) A-G intron -    22484847 chr12:122991728(-) A-G intron -    22484847 chr12:122991778(-) A-G intron -    22484847 chr12:122993873(-) A-G intron -    22484847 chr12:122996510(-) A-G intron -    22484847 chr12:122996518(-) A-G intron -    22484847 chr12:122996547(-) A-G intron -    22484847 chr12:122996549(-) A-G intron -    22484847 chr12:122997040(-) A-G intron -    22484847 chr12:122997049(-) A-G intron -    22484847 chr12:122997121(-) A-G intron -    22484847 chr12:122997157(-) A-G intron -    22484847 chr12:122997227(-) A-G intron -    22484847 chr12:122998493(-) A-G intron -    22484847 chr12:122998571(-) A-G intron -    22484847 chr12:122998885(-) A-G intron -    22484847 chr12:122998908(-) A-G intron -    22484847 chr12:122998909(-) A-G intron -    22484847 chr12:123000047(-) A-G intron -    22484847 chr12:122990424(-) A-G intron -    22484847 chr12:122990428(-) A-G intron -    22484847 chr12:122990736(-) A-G intron -    22484847 chr12:122991804(-) A-G intron -    22484847 chr12:122991843(-) A-G intron -    22484847 chr12:122991924(-) A-G intron -    22484847 chr12:122992335(-) A-G intron -    22484847 chr12:122992485(-) A-G intron -    22484847 chr12:122992547(-) A-G intron -    22484847 chr12:122992583(-) A-G intron -    22484847 chr12:122992600(-) A-G intron -    22484847 chr12:122993395(-) G-A intron -    22484847 chr12:122993754(-) T-C intron -    22484847 chr12:122994471(-) A-G intron -    22484847 chr12:122994509(-) A-G intron -    22484847 chr12:122994533(-) A-G intron -    22484847 chr12:122994620(-) A-G intron -    22484847 chr12:122994641(-) A-G intron -    22484847 chr12:122994933(-) A-G intron -    22484847 chr12:122996421(-) A-G intron -    22484847 chr12:122996422(-) A-G intron -    22484847 chr12:122996450(-) A-G intron -    22484847 chr12:122996532(-) A-G intron -    22484847 chr12:122996533(-) A-G intron -    22484847 chr12:122996558(-) A-G intron -    22484847 chr12:122996620(-) A-G intron -    22484847 chr12:122996625(-) A-G intron -    22484847 chr12:122996626(-) A-G intron -    22484847 chr12:122997098(-) A-G intron -    22484847 chr12:122997115(-) A-G intron -    22484847 chr12:122997131(-) A-G intron -    22484847 chr12:122997155(-) A-G intron -    22484847 chr12:122997162(-) A-G intron -    22484847 chr12:122997197(-) A-G intron -    22484847 chr12:122997216(-) A-G intron -    22484847 chr12:122997217(-) A-G intron -    22484847 chr12:122997547(-) A-G intron -    22484847 chr12:122997573(-) A-G intron -    22484847 chr12:122997575(-) A-G intron -    22484847 chr12:122997576(-) A-G intron -    22484847 chr12:122997660(-) A-G intron -    22484847 chr12:122998479(-) A-G intron -    22484847 chr12:122998496(-) A-G intron -    22484847 chr12:122998884(-) A-G intron -    22484847 chr12:122998950(-) A-G intron -    22484847 chr12:123000436(-) A-G intron -    22484847 chr12:123000530(-) A-G intron -    22484847 chr12:123001522(-) A-G intron -    22484847 chr12:123007962(-) A-G intron -    22484847 chr12:123007980(-) A-C intron -    22484847 chr12:123009879(-) G-A intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RSRC2	chr12:122989864-122989865(-) m6A 3'UTR//exon       24284625//27773535 chr12:122989874-122989875(-) m6A 3'UTR//exon       24284625//27773535 chr12:122989889-122989890(-) m6A 3'UTR//exon       24284625//27773535 chr12:122990003-122990004(-) m6A 3'UTR//exon       24284625//24981863//26404942//27773535//22608085 chr12:122990038-122990039(-) m6A 3'UTR//exon       24284625//24981863//28052920//26404942//27773535//22608085 chr12:122990046-122990047(-) m6A 3'UTR//exon       24284625//24981863//28052920//26404942//27773535//22608085 chr12:122990138-122990139(-) m6A 3'UTR//CDS//exon       24284625//24981863//28052920//27773535//22575960//22608085 chr12:122990204-122990205(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535//22575960//22608085 chr12:122990924-122990925(-) m6A exon//intron       24981863//27773535 chr12:122991417-122991418(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535 chr12:122991423-122991424(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535 chr12:122991468-122991469(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535 chr12:122991543-122991544(-) m6A exon//intron       27773535 chr12:122991591-122991592(-) m6A exon//intron       27773535 chr12:122992809-122992810(-) m6A 3'UTR//CDS//exon       27773535 chr12:122992871-122992872(-) m6A 3'UTR//CDS//exon       27773535 chr12:122992940-122992941(-) m6A 3'UTR//CDS//exon       27773535 chr12:122995674-122995675(-) m6A 3'UTR//CDS//exon       24981863//27773535 chr12:122995680-122995681(-) m6A 3'UTR//CDS//exon       24981863//27773535 chr12:122995707-122995708(-) m6A 3'UTR//CDS//exon       24981863//27773535 chr12:122998326-122998327(-) m6A 3'UTR//exon//intron       24981863//27773535 chr12:122998337-122998338(-) m6A 3'UTR//exon//intron       24981863//27773535 chr12:122998353-122998354(-) m6A 3'UTR//exon//intron       24981863//27773535 chr12:122999687-122999688(-) m6A 3'UTR//CDS//exon       24209618//24981863//28052920//27773535//27371828 chr12:122999718-122999719(-) m6A 3'UTR//CDS//exon       24209618//24981863//28052920//27773535//27371828 chr12:123001789-123001790(-) m6A 3'UTR//CDS//exon       24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr12:123001807-123001808(-) m6A 3'UTR//CDS//exon       24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr12:123001820-123001821(-) m6A 3'UTR//CDS//exon       24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr12:123001829-123001830(-) Am 3'UTR//CDS//exon       - chr12:123003454-123003455(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535 chr12:123003507-123003508(-) m6A 3'UTR//5'UTR//CDS//exon       24981863//28052920//27773535 chr12:123003522-123003523(-) m6A 3'UTR//5'UTR//CDS//exon       24981863//28052920//27773535 chr12:123003537-123003538(-) m6A 3'UTR//5'UTR//CDS//exon       24981863//28052920//27773535 chr12:123003567-123003568(-) m6A 3'UTR//5'UTR//CDS//exon       24981863//27773535 chr12:123003579-123003580(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535 chr12:123003596-123003597(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535 chr12:123004374-123004375(-) m6A exon//intron       - chr12:123004418-123004419(-) m6A exon//intron       - chr12:123005087-123005088(-) m6A 3'UTR//5'UTR//exon//intron       27773535 chr12:123005103-123005104(-) m6A 3'UTR//5'UTR//CDS//exon//intron       27773535 chr12:123005108-123005109(-) m6A 5'UTR//CDS//exon//intron       27773535 chr12:123005958-123005959(-) m6A 5'UTR//CDS//exon       24981863//27773535 chr12:123006741-123006742(-) m6A 5'UTR//CDS//exon//intron       24981863//27773535 chr12:123006806-123006807(-) m6A 5'UTR//CDS//exon//intron       24981863//27773535//27371828 chr12:123006822-123006823(-) m6A 5'UTR//CDS//exon//intron       24981863//27773535//27371828 chr12:123006853-123006854(-) m6A exon//intron       24981863//27773535//27371828 chr12:123006874-123006875(-) m6A exon//intron       24981863//27773535//27371828 chr12:123006895-123006896(-) m6A exon//intron       24284625//24981863//27773535//27371828 chr12:123010791-123010792(-) m6A 5'UTR//intron       24981863 chr12:123011402-123011403(-) m6A 5'UTR//exon       24981863 chr12:123011409-123011410(-) m6A 5'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RSRC2	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B20-3p
Interactor2: RSRC2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg