Basic Information:

  VIRBase ID:  

VHID00535764

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B20-3p:  MIMAT0031158          SH3GLB1:  NM_016009     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B20-3p	SH3GLB1
miRBase Accession/Entrez ID	MIMAT0031158	51100
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Bif-1//CGI-61//dJ612B15.2//PPP1R70

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SH3GLB1	chr1:87207942(+) A-I      Syn:Val->Val chr1:87205594(+) A-I      intronic chr1:87205578(+) A-I      intronic chr1:87205782(+) A-I      intronic chr1:87208545(+) A-I      intronic chr1:87204342(+) A-I      intronic chr1:87208387(+) A-I      intronic chr1:87204467(+) A-I      intronic chr1:87205718(+) A-I      intronic chr1:87205621(+) A-I      intronic chr1:87205752(+) A-I      intronic chr1:87204090(+) A-I      intronic chr1:87197601(+) A-I      intronic chr1:87208380(+) A-I      intronic chr1:87208410(+) A-I      intronic chr1:87204379(+) A-I      intronic chr1:87205753(+) A-I      intronic chr1:87205663(+) A-I      intronic chr1:87205722(+) A-I      intronic chr1:87204451(+) A-I      intronic chr1:87196367(+) A-I      intronic chr1:87205708(+) A-I      intronic chr1:87204532(+) A-I      intronic chr1:87196364(+) A-I      intronic chr1:87197543(+) A-I      intronic chr1:87205762(+) A-I      intronic chr1:87205726(+) A-I      intronic chr1:87205682(+) A-I      intronic chr1:87204155(+) A-I      intronic chr1:87197722(+) A-I      intronic chr1:87197718(+) A-I      intronic chr1:87204459(+) A-I      intronic chr1:87204382(+) A-I      intronic chr1:87204088(+) A-I      intronic chr1:87205758(+) A-I      intronic chr1:87205790(+) A-I      intronic chr1:87212297(+) A-I      3'UTR chr1:87205714(+) A-I      intronic chr1:87197553(+) A-I      intronic chr1:87204617(+) A-I      intronic chr1:87205632(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SH3GLB1	chr1:87188959(+) T-C intron -    22484847 chr1:87196367(+) A-G intron -    22484847 chr1:87196375(+) T-G intron -    22484847 chr1:87197601(+) A-G intron -    22484847 chr1:87204227(+) C-T intron -    22484847 chr1:87204382(+) A-G intron -    22484847 chr1:87204441(+) T-C intron -    22484847 chr1:87204532(+) A-G intron -    22484847 chr1:87205708(+) A-G intron -    22484847 chr1:87205714(+) A-G intron -    22484847 chr1:87205722(+) A-G intron -    22484847 chr1:87208380(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SH3GLB1	chr1:87170272-87170273(+) m6A 5'UTR       24981863//22608085 chr1:87170609-87170610(+) m1A 5'UTR//CDS       26863410//26863196 chr1:87181499-87181500(+) m6A CDS//intron       27773535 chr1:87181516-87181517(+) m6A CDS//intron       27773535 chr1:87185259-87185260(+) m6A 5'UTR//CDS       26404942 chr1:87185268-87185269(+) m6A 5'UTR//CDS       26404942 chr1:87185290-87185291(+) m6A CDS       26404942 chr1:87185308-87185309(+) m6A CDS       26404942 chr1:87208087-87208088(+) m6A CDS       27773535//22608085 chr1:87208847-87208848(+) m6A CDS       24284625//24981863//27773535//22608085 chr1:87208871-87208872(+) m6A CDS       24284625//24981863//27773535//22608085 chr1:87208905-87208906(+) m6A CDS       24284625//24981863//27773535//22608085 chr1:87208926-87208927(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr1:87209020-87209021(+) m6A 3'UTR       24981863//22608085 chr1:87209043-87209044(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SH3GLB1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B20-3p
Interactor2: SH3GLB1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg