Detail Information

Basic Information:


  VIRBase ID:  

VHID00534404

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B20-3p:           NAP1L4:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B20-3p NAP1L4
miRBase
Accession/Entrez ID		 MIMAT0031158 4676
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - hNAP2//NAP1L4b//NAP2//NAP2L

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NAP1L4
chr11:3004320(-) A-I      intronic
chr11:3004129(-) A-I      intronic
chr11:2988661(-) A-I      intronic
chr11:3004720(-) A-I      intronic
chr11:3004150(-) A-I      intronic
chr11:2986898(-) A-I      intronic
chr11:3007360(-) A-I      intronic
chr11:3001590(-) A-I      intronic
chr11:3004167(-) A-I      intronic
chr11:3004650(-) A-I      intronic
chr11:3004697(-) A-I      intronic
chr11:3001682(-) A-I      intronic
chr11:3002202(-) A-I      intronic
chr11:3001515(-) A-I      intronic
chr11:2996461(-) A-I      intronic
chr11:3000840(-) A-I      intronic
chr11:2996465(-) A-I      intronic
chr11:3001593(-) A-I      intronic
chr11:3004164(-) A-I      intronic
chr11:3008822(-) A-I      intronic
chr11:3000890(-) A-I      intronic
chr11:2995028(-) A-I      intronic
chr11:3007929(-) A-I      intronic
chr11:3008985(-) A-I      intronic
chr11:3001592(-) A-I      intronic
chr11:2996726(-) A-I      intronic
chr11:3001591(-) A-I      intronic
chr11:2996471(-) A-I      intronic
chr11:3002255(-) A-I      intronic
chr11:3001595(-) A-I      intronic
chr11:3001618(-) A-I      intronic
chr11:3001628(-) A-I      intronic
chr11:2995077(-) A-I      intronic
chr11:3007492(-) A-I      intronic
chr11:3008940(-) A-I      intronic
chr11:3002238(-) A-I      intronic
chr11:3004705(-) A-I      intronic
chr11:3001689(-) A-I      intronic
chr11:2995096(-) A-I      intronic
chr11:3002464(-) A-I      intronic
chr11:2995059(-) A-I      intronic
chr11:3000939(-) A-I      intronic
chr11:2996420(-) A-I      intronic
chr11:3001501(-) A-I      intronic
chr11:3002854(-) A-I      intronic
chr11:3002867(-) A-I      intronic
chr11:3007980(-) A-I      intronic
chr11:2990394(-) A-I      intronic
chr11:3001594(-) A-I      intronic
chr11:3002892(-) A-I      intronic
chr11:3002908(-) A-I      intronic
chr11:3004698(-) A-I      intronic
chr11:3008801(-) A-I      intronic
chr11:3002933(-) A-I      intronic
chr11:3002945(-) A-I      intronic
chr11:3003019(-) A-I      intronic
chr11:2990336(-) A-I      intronic
chr11:3008742(-) A-I      intronic
chr11:3002974(-) A-I      intronic
chr11:3007922(-) A-I      intronic
chr11:2996426(-) A-I      intronic
chr11:3002814(-) A-I      intronic
chr11:3003056(-) A-I      intronic
chr11:2995270(-) A-I      intronic
chr11:3004068(-) A-I      intronic
chr11:2995130(-) A-I      intronic
chr11:3004071(-) A-I      intronic
chr11:3007895(-) A-I      intronic
chr11:3008059(-) A-I      intronic
chr11:2976503(-) A-I      intronic
chr11:3007976(-) A-I      intronic
chr11:3008607(-) A-I      intronic
chr11:3007557(-) A-I      intronic
chr11:2995896(-) A-I      intronic
chr11:3008630(-) A-I      intronic
chr11:3002294(-) A-I      intronic
chr11:3002277(-) A-I      intronic
chr11:3004722(-) A-I      intronic
chr11:3002346(-) A-I      intronic
chr11:3002615(-) A-I      intronic
chr11:3005038(-) A-I      intronic
chr11:3000969(-) A-I      intronic
chr11:3002356(-) A-I      intronic
chr11:2990390(-) A-I      intronic
chr11:2994160(-) A-I      intronic
chr11:3001472(-) A-I      intronic
chr11:2996453(-) A-I      intronic
chr11:2994155(-) A-I      intronic
chr11:3008819(-) A-I      intronic
chr11:3008051(-) A-I      intronic
chr11:3005133(-) A-I      intronic
chr11:3007986(-) A-I      intronic
chr11:2990398(-) A-I      intronic
chr11:3002462(-) A-I      intronic
chr11:2996485(-) A-I      intronic
chr11:3007347(-) A-I      intronic
chr11:2996448(-) A-I      intronic
chr11:3004679(-) A-I      intronic
chr11:3000773(-) A-I      intronic
chr11:3001695(-) A-I      intronic
chr11:3001643(-) A-I      intronic
chr11:3007544(-) A-I      intronic
chr11:3004204(-) A-I      intronic
chr11:3001597(-) A-I      intronic
chr11:2990480(-) A-I      intronic
chr11:3001666(-) A-I      intronic
chr11:3005202(-) A-I      intronic
chr11:2995277(-) A-I      intronic
chr11:3003054(-) A-I      intronic
chr11:3002895(-) A-I      intronic
chr11:3001542(-) A-I      intronic
chr11:3008865(-) A-I      intronic
chr11:3002994(-) A-I      intronic
chr11:3007558(-) A-I      intronic
chr11:2996232(-) A-I      intronic
chr11:3007429(-) A-I      intronic
chr11:2990385(-) A-I      intronic
chr11:2976708(-) A-I      intronic
chr11:3005277(-) A-I      intronic
chr11:2995248(-) A-I      intronic
chr11:3000880(-) A-I      intronic
chr11:2990401(-) A-I      intronic
chr11:3004187(-) A-I      intronic
chr11:3001506(-) A-I      intronic
chr11:2994118(-) A-I      intronic
chr11:3001546(-) A-I      intronic
chr11:3002970(-) A-I      intronic
chr11:3007933(-) A-I      intronic
chr11:3002802(-) A-I      intronic
chr11:3008650(-) A-I      intronic
chr11:2995284(-) A-I      intronic
chr11:3008105(-) A-I      intronic
chr11:3008741(-) A-I      intronic
chr11:2996744(-) A-I      intronic
chr11:2996715(-) A-I      intronic
chr11:3002344(-) A-I      intronic
chr11:3001574(-) A-I      intronic
chr11:3002957(-) A-I      intronic
chr11:2976709(-) A-I      intronic
chr11:2986846(-) A-I      intronic
chr11:3001585(-) A-I      intronic
chr11:3001619(-) A-I      intronic
chr11:3003050(-) A-I      intronic
chr11:2976703(-) A-I      intronic
chr11:3001614(-) A-I      intronic
chr11:3001582(-) A-I      intronic
chr11:3005718(-) A-I      intronic
chr11:3008052(-) A-I      intronic
chr11:3001550(-) A-I      intronic
chr11:3007399(-) A-I      intronic
chr11:2995101(-) A-I      intronic
chr11:3008096(-) A-I      intronic
chr11:3002935(-) A-I      intronic
chr11:3004719(-) A-I      intronic
chr11:3001510(-) A-I      intronic
chr11:3001711(-) A-I      intronic
chr11:3007440(-) A-I      intronic
chr11:3004674(-) A-I      intronic
chr11:3008132(-) A-I      intronic
chr11:3008061(-) A-I      intronic
chr11:3002405(-) A-I      intronic
chr11:2995244(-) A-I      intronic
chr11:2995293(-) A-I      intronic
chr11:3002842(-) A-I      intronic
chr11:2996158(-) A-I      intronic
chr11:3007359(-) A-I      intronic
chr11:2996531(-) A-I      intronic
chr11:3007441(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NAP1L4
chr11:2976503(-) A-I intron -    15342557
chr11:2976584(-) A-I intron -    15342557
chr11:2976703(-) A-I intron -    15342557
chr11:2976708(-) A-I intron -    15342557
chr11:2976709(-) A-I intron -    15342557
chr11:2995284(-) A-I intron -    22327324
chr11:3001582(-) A-I intron -    22327324
chr11:3001597(-) A-I intron -    22327324
chr11:2983062(-) A-I intron -    21960545
chr11:3001614(-) A-I intron -    21960545
chr11:2973040(-) G-T intron -    21725310
chr11:2994160(-) A-G intron -    22484847
chr11:2995270(-) A-G intron -    22484847
chr11:2995277(-) A-G intron -    22484847
chr11:2995284(-) A-G intron -    22484847
chr11:3001574(-) A-G intron -    22484847
chr11:3001582(-) A-G intron -    22484847
chr11:3001597(-) A-G intron -    22484847
chr11:3001614(-) A-G intron -    22484847
chr11:3001643(-) A-G intron -    22484847
chr11:3001711(-) A-G intron -    22484847
chr11:3007976(-) A-G intron -    22484847
chr11:3008059(-) A-G intron -    22484847
chr11:3008607(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NAP1L4
chr11:2965743-2965744(-) m6A 3'UTR//exon       24284625//27773535
chr11:2965977-2965978(-) m6A 3'UTR//exon       24284625//24981863//22575960
chr11:2966187-2966188(-) m6A 3'UTR//exon       24284625
chr11:2966417-2966418(-) m6A 3'UTR//exon       24284625//25456834//24981863//28052920//26404942//27371828
chr11:2966445-2966446(-) m6A 3'UTR//exon       24284625//25456834//24981863//28052920//26404942//27371828
chr11:2966471-2966472(-) m6A 3'UTR//exon       24284625//25456834//24981863//28052920//27371828
chr11:2966545-2966546(-) m6A 3'UTR//exon       24284625//25456834//24981863//22575960
chr11:2966582-2966583(-) m6A 3'UTR//exon       24284625//22575960
chr11:2966591-2966592(-) Y 3'UTR//exon       26075521
chr11:2966747-2966748(-) m6A 3'UTR//exon       24284625//24209618//24981863
chr11:2966799-2966800(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535
chr11:2966812-2966813(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535
chr11:2966870-2966871(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535
chr11:2973022-2973023(-) m1A 3'UTR//CDS//exon       26863196
chr11:2973031-2973032(-) m1A 3'UTR//CDS//exon       26863196
chr11:2973068-2973069(-) m6A exon//intron       24284625//24209618//24981863//27773535//27371828
chr11:2973105-2973106(-) m6A exon//intron       24284625//24981863//27773535
chr11:2973149-2973150(-) m6A exon//intron       27773535
chr11:2975673-2975674(-) m6A exon//intron       24981863
chr11:2975831-2975832(-) m6A CDS//exon       24981863
chr11:2979674-2979675(-) m6A CDS//exon       24981863
chr11:2979685-2979686(-) m6A CDS//exon       24981863
chr11:2979730-2979731(-) m6A CDS//exon       24981863
chr11:2991159-2991160(-) m6A CDS//intron       24981863//22575960
chr11:2992722-2992723(-) Gm CDS//intron       -
chr11:2992734-2992735(-) m6A CDS//intron       24981863//22575960
chr11:2993433-2993434(-) m6A CDS       24981863
chr11:3000457-3000458(-) m6A 5'UTR//intron       24981863//27371828
chr11:3013474-3013475(-) m6A 5'UTR//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NAP1L4
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B20-3p
Interactor2: NAP1L4

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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