Basic Information:

  VIRBase ID:  

VHID00533898

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B20-3p:  MIMAT0031158          MS4A1:  NM_152867     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B20-3p	MS4A1
miRBase Accession/Entrez ID	MIMAT0031158	931
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	B1//Bp35//CD20//CVID5//FMC7//LEU-16//MS4A2//S7

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MS4A1	chr11:60229198(+) A-I      intronic chr11:60227509(+) A-I      intronic chr11:60229134(+) A-I      intronic chr11:60227518(+) A-I      intronic chr11:60229254(+) A-I      intronic chr11:60229092(+) A-I      intronic chr11:60227517(+) A-I      intronic chr11:60229093(+) A-I      intronic chr11:60229024(+) A-I      intronic chr11:60227523(+) A-I      intronic chr11:60224347(+) A-I      intronic chr11:60229202(+) A-I      intronic chr11:60229213(+) A-I      intronic chr11:60229073(+) A-I      intronic chr11:60229012(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MS4A1	chr11:60224347(+) A-G intron -    22484847 chr11:60227509(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MS4A1	chr11:60235757-60235758(+) m6A CDS//exon       - chr11:60235800-60235801(+) m6A CDS//exon       - chr11:60235828-60235829(+) m6A CDS       - chr11:60235869-60235870(+) m6A CDS       - chr11:60235879-60235880(+) m6A CDS       - chr11:60235889-60235890(+) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MS4A1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B20-3p
Interactor2: MS4A1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg