Detail Information

Basic Information:


  VIRBase ID:  

VHID00532945

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B20-5p:           MFSD4A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B20-5p MFSD4A
miRBase
Accession/Entrez ID
MIMAT0012172 148808
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - MFSD4//SLC60A1//UNQ3064

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MFSD4A
chr1:205566591(+) A-I      intronic
chr1:205566643(+) A-I      intronic
chr1:205566646(+) A-I      intronic
chr1:205542925(+) A-I      intronic
chr1:205542960(+) A-I      intronic
chr1:205542971(+) A-I      intronic
chr1:205557491(+) A-I      intronic
chr1:205542992(+) A-I      intronic
chr1:205543313(+) A-I      intronic
chr1:205543319(+) A-I      intronic
chr1:205543373(+) A-I      intronic
chr1:205543374(+) A-I      intronic
chr1:205557422(+) A-I      intronic
chr1:205557442(+) A-I      intronic
chr1:205557487(+) A-I      intronic
chr1:205566634(+) A-I      intronic
chr1:205555848(+) A-I      intronic
chr1:205542869(+) A-I      intronic
chr1:205557523(+) A-I      intronic
chr1:205542844(+) A-I      intronic
chr1:205560356(+) A-I      intronic
chr1:205560499(+) A-I      intronic
chr1:205566032(+) A-I      intronic
chr1:205556025(+) A-I      intronic
chr1:205557436(+) A-I      intronic
chr1:205566556(+) A-I      intronic
chr1:205560449(+) A-I      intronic
chr1:205560362(+) A-I      intronic
chr1:205566629(+) A-I      intronic
chr1:205543426(+) A-I      intronic
chr1:205542281(+) A-I      intronic
chr1:205565607(+) A-I      intronic
chr1:205556108(+) A-I      intronic
chr1:205557519(+) A-I      intronic
chr1:205566656(+) A-I      intronic
chr1:205560454(+) A-I      intronic
chr1:205560575(+) A-I      intronic
chr1:205560560(+) A-I      intronic
chr1:205543034(+) A-I      intronic
chr1:205542965(+) A-I      intronic
chr1:205560427(+) A-I      intronic
chr1:205566548(+) A-I      intronic
chr1:205557504(+) A-I      intronic
chr1:205556088(+) A-I      intronic
chr1:205543063(+) A-I      intronic
chr1:205565604(+) A-I      intronic
chr1:205542967(+) A-I      intronic
chr1:205557518(+) A-I      intronic
chr1:205560373(+) A-I      intronic
chr1:205564018(+) A-I      intronic
chr1:205556022(+) A-I      intronic
chr1:205542928(+) A-I      intronic
chr1:205556100(+) A-I      intronic
chr1:205543006(+) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MFSD4A
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B20-5p
Interactor2: MFSD4A

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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