Detail Information

Basic Information:


  VIRBase ID:  

VHID00532936

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B20-5p:           DIRAS1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B20-5p DIRAS1
miRBase
Accession/Entrez ID
MIMAT0012172 148252
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - Di-Ras1//GBTS1//RIG

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DIRAS1
chr19:2714609-2714610(-) m6A 3'UTR       -
chr19:2714714-2714715(-) m6A 3'UTR       24284625//25456834//24981863
chr19:2714770-2714771(-) m6A 3'UTR       24284625//25456834
chr19:2716279-2716280(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr19:2716324-2716325(-) m6A 3'UTR       24284625//25456834//24981863//27773536//22608085
chr19:2716394-2716395(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr19:2716426-2716427(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr19:2716445-2716446(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr19:2716461-2716462(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr19:2716527-2716528(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr19:2716827-2716828(-) m6A 3'UTR       24284625//25456834//24981863//22608085
chr19:2716885-2716886(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr19:2716929-2716930(-) m6A 3'UTR       24284625//25456834//24981863//22608085
chr19:2716971-2716972(-) m6A 3'UTR       24284625//25456834//24981863//27773536
chr19:2717084-2717085(-) m6A 3'UTR       24284625//25456834//27773536
chr19:2717242-2717243(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085
chr19:2717289-2717290(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085
chr19:2717343-2717344(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22575960//22608085
chr19:2717359-2717360(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22575960//22608085
chr19:2717412-2717413(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085
chr19:2717466-2717467(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085
chr19:2717622-2717623(-) m6A CDS       24284625//27773536//22608085
chr19:2717679-2717680(-) m6A CDS       24284625//27773536
chr19:2717795-2717796(-) m6A CDS       24284625//24209618//25456834//27773536
chr19:2721314-2721315(-) m6A 5'UTR       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DIRAS1
Chromatin K562 cells     -
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B20-5p
Interactor2: DIRAS1

Evidence Support:


Prediction-Evidence miRanda//PITA
Support Database VmiReg

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