Detail Information

Basic Information:


  VIRBase ID:  

VHID00532719

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B20-5p:           OVCA2:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B20-5p OVCA2
miRBase
Accession/Entrez ID
MIMAT0012172 124641
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase OVCA2
chr17:1945416-1945417(+) m6A CDS       24981863
chr17:1945519-1945520(+) m6A CDS       -
chr17:1945680-1945681(+) m6A intron       24284625
chr17:1945778-1945779(+) m6A intron       24981863//27773535
chr17:1945817-1945818(+) m6A intron       27773535
chr17:1946033-1946034(+) m6A CDS       24284625//25456834//24981863//26404942
chr17:1946243-1946244(+) m6A CDS       24284625//24981863//26404942
chr17:1946381-1946382(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:1946471-1946472(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:1946507-1946508(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:1946519-1946520(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:1946538-1946539(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:1946598-1946599(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:1946620-1946621(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate OVCA2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B20-5p
Interactor2: OVCA2

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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