Basic Information:

  VIRBase ID:  

VHID00530961

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B20-5p:  MIMAT0012172          COMMD5:  NM_001081003     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B20-5p	COMMD5
miRBase Accession/Entrez ID	MIMAT0012172	28991
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HCARG//HT002

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	COMMD5	chr8:146066681-146066682(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr8:146066723-146066724(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:146066729-146066730(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:146066880-146066881(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr8:146066905-146066906(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr8:146066947-146066948(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr8:146066967-146066968(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr8:146067074-146067075(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:146075841-146075842(-) m6A 3'UTR//intron       24284625 chr8:146076010-146076011(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr8:146076052-146076053(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr8:146076060-146076061(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr8:146076349-146076350(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr8:146076361-146076362(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr8:146076391-146076392(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr8:146076535-146076536(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr8:146076592-146076593(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr8:146076598-146076599(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr8:146076764-146076765(-) m6A 5'UTR       24284625//24209618//27371828//27773536 chr8:146077872-146077873(-) m6A 5'UTR//intron       24284625//27371828//27773536 chr8:146078207-146078208(-) m6A 5'UTR//intron       24284625 chr8:146078358-146078359(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828 chr8:146078422-146078423(-) m6A 5'UTR//intron       24284625//25456834//24981863 chr8:146078861-146078862(-) m6A 5'UTR       24284625//24981863//27371828//27773536 chr8:146078875-146078876(-) m6A 5'UTR       24981863//27371828//27773536 chr8:146078890-146078891(-) m6A 5'UTR       24981863//27371828//27773536 chr8:146078948-146078949(-) m6A 5'UTR       24981863 chr8:146078992-146078993(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	COMMD5	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B20-5p
Interactor2: COMMD5

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg