Basic Information:

  VIRBase ID:  

VHID00530865

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B20-5p:  MIMAT0012172          SENP3:  NM_015670     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B20-5p	SENP3
miRBase Accession/Entrez ID	MIMAT0012172	26168
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SMT3IP1//SSP3//Ulp1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SENP3	chr17:7470769(+) A-I      intronic chr17:7470765(+) A-I      intronic chr17:7469904(+) A-I      intronic chr17:7472605(+) A-I      intronic chr17:7472582(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SENP3	chr17:7465195-7465196(+) m6A 5'UTR       24981863 chr17:7465474-7465475(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960 chr17:7466402-7466403(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:7466414-7466415(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr17:7466443-7466444(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr17:7466509-7466510(+) m6A CDS       24284625//24209618//24981863//22575960 chr17:7466558-7466559(+) m6A CDS       24284625//24209618//24981863//22575960 chr17:7466631-7466632(+) m1A CDS       26863196//26863410 chr17:7466711-7466712(+) m6A CDS       24284625//24209618//25456834//24981863//22575960 chr17:7466753-7466754(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:7466889-7466890(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:7467067-7467068(+) m6A CDS       24284625//25456834//24981863//22575960 chr17:7467077-7467078(+) m6A CDS       24284625//25456834//24981863//22575960 chr17:7467096-7467097(+) m6A CDS       24284625//25456834//22575960 chr17:7467731-7467732(+) m6A exon//intron       24284625 chr17:7467762-7467763(+) m6A exon//intron       24284625 chr17:7467978-7467979(+) m6A CDS//exon       24284625//22575960 chr17:7468058-7468059(+) m6A CDS//exon       24284625//22575960 chr17:7474739-7474740(+) m6A 3'UTR//CDS//exon       - chr17:7474749-7474750(+) m6A 3'UTR//CDS//exon       - chr17:7474788-7474789(+) m6A CDS//exon       - chr17:7474815-7474816(+) m6A 3'UTR//exon//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SENP3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B20-5p
Interactor2: SENP3

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg