Basic Information:

  VIRBase ID:  

VHID00529961

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B20-5p:  MIMAT0012172          DEDD:  NM_001039712     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B20-5p	DEDD
miRBase Accession/Entrez ID	MIMAT0012172	9191
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CASP8IP1//DEDD1//DEFT//FLDED1//KE05

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DEDD	chr1:161094786(-) A-I      intronic chr1:161094774(-) A-I      intronic chr1:161094803(-) A-I      intronic chr1:161094771(-) A-I      intronic chr1:161094804(-) A-I      intronic chr1:161098283(-) A-I      intronic chr1:161095420(-) A-I      intronic chr1:161098315(-) A-I      intronic chr1:161095389(-) A-I      intronic chr1:161099211(-) A-I      intronic chr1:161095388(-) A-I      intronic chr1:161095587(-) A-I      intronic chr1:161095326(-) A-I      intronic chr1:161098198(-) A-I      intronic chr1:161098188(-) A-I      intronic chr1:161096405(-) A-I      intronic chr1:161098296(-) A-I      intronic chr1:161094764(-) A-I      intronic chr1:161095429(-) A-I      intronic chr1:161099128(-) A-I      intronic chr1:161098236(-) A-I      intronic chr1:161096427(-) A-I      intronic chr1:161098199(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DEDD	chr1:161096336(-) T-C intron -    22484847 chr1:161098188(-) A-G intron -    22484847 chr1:161098198(-) A-G intron -    22484847 chr1:161098199(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DEDD	chr1:161090782-161090783(-) m6A 3'UTR//exon       27773535 chr1:161090803-161090804(-) m6A 3'UTR//exon       27773535 chr1:161090855-161090856(-) m6A 3'UTR//exon       24981863//27773535 chr1:161090861-161090862(-) m6A 3'UTR//exon       24981863//27773535 chr1:161091358-161091359(-) m6A 3'UTR//intron       24981863 chr1:161091439-161091440(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535 chr1:161091501-161091502(-) m6A 3'UTR//intron       24284625//24209618//27773535 chr1:161091541-161091542(-) m6A 3'UTR//exon//intron       27773535 chr1:161091803-161091804(-) m6A 3'UTR//exon//intron       24284625//24209618//24981863//27773535 chr1:161091910-161091911(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:161091961-161091962(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:161091972-161091973(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:161091994-161091995(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:161092057-161092058(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:161092174-161092175(-) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr1:161092234-161092235(-) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr1:161092271-161092272(-) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//27371828 chr1:161092305-161092306(-) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//27371828 chr1:161092799-161092800(-) m6A CDS//intron       24284625//24981863//27371828 chr1:161092808-161092809(-) m6A CDS//intron       24284625//24981863//27371828 chr1:161092829-161092830(-) m6A CDS//intron       24284625 chr1:161092870-161092871(-) m6A CDS//exon//intron       24284625 chr1:161094075-161094076(-) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr1:161094192-161094193(-) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//27371828//22608085 chr1:161100630-161100631(-) m6A 5'UTR//exon//intron       24284625//24209618//24981863//27773535//27371828 chr1:161100805-161100806(-) m6A exon//intron       24284625//24209618//24981863//27371828 chr1:161101920-161101921(-) m6A exon//intron       24981863 chr1:161101925-161101926(-) m6A exon//intron       24981863 chr1:161102213-161102214(-) m6A 5'UTR//exon//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DEDD	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B20-5p
Interactor2: DEDD

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg