Detail Information

Basic Information:


  VIRBase ID:  

VHID00528006

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:           PPAN-P2RY11:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B4 PPAN-P2RY11
miRBase
Accession/Entrez ID
MIMAT0012171 692312
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - BXDC3//P2RY11//P2Y11//PPAN//Ssf-1//SSF1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PPAN-P2RY11
chr19:10219307(+) A-I      intronic
chr19:10220025(+) A-I      intronic
chr19:10219239(+) A-I      intronic
chr19:10219832(+) A-I      intronic
chr19:10220083(+) A-I      intronic
chr19:10219731(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PPAN-P2RY11
chr19:10217060-10217061(+) m6A 5'UTR       24284625//25456834//24981863
chr19:10217075-10217076(+) m6A CDS       24284625//25456834//24981863
chr19:10217240-10217241(+) m6A CDS       24284625
chr19:10218193-10218194(+) m6A CDS       24284625
chr19:10218205-10218206(+) m6A CDS       24284625
chr19:10218261-10218262(+) m6A CDS       24284625
chr19:10218267-10218268(+) m6A CDS       24284625
chr19:10218781-10218782(+) m6A CDS       24284625//22575960
chr19:10220310-10220311(+) m6A CDS       22575960
chr19:10220316-10220317(+) m6A CDS       22575960
chr19:10220370-10220371(+) m6A CDS       -
chr19:10220489-10220490(+) Tm intron       -
chr19:10220674-10220675(+) m6A CDS       22575960
chr19:10220736-10220737(+) m6A intron       -
chr19:10220744-10220745(+) m6A intron       -
chr19:10220749-10220750(+) m6A intron       -
chr19:10220942-10220943(+) m6A intron       24284625//24209618
chr19:10221210-10221211(+) m1A CDS       26863196//26863410
chr19:10221397-10221398(+) m1A CDS       26863196//26863410
chr19:10221483-10221484(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr19:10221733-10221734(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr19:10221740-10221741(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr19:10221959-10221960(+) m6A intron       24284625//24209618//25456834//24981863//22575960//22608085
chr19:10222185-10222186(+) m6A intron       24284625//25456834//24981863
chr19:10222215-10222216(+) m6A intron       24284625//25456834//24981863
chr19:10222358-10222359(+) m6A intron       24284625//25456834//24981863
chr19:10222370-10222371(+) m6A intron       24284625//24209618//25456834//24981863
chr19:10224354-10224355(+) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr19:10224374-10224375(+) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr19:10224868-10224869(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085
chr19:10224875-10224876(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085
chr19:10225148-10225149(+) m6A 3'UTR//CDS       24284625//24981863//22575960//22608085
chr19:10225307-10225308(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr19:10225316-10225317(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr19:10225377-10225378(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PPAN-P2RY11
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B4
Interactor2: PPAN-P2RY11

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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