Basic Information:

  VIRBase ID:  

VHID00527976

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:  MIMAT0012171          ATXN7L3B:  NM_001136262     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B4	ATXN7L3B
miRBase Accession/Entrez ID	MIMAT0012171	552889
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	lnc-SCA7

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ATXN7L3B	chr12:74934946(+) G-A intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ATXN7L3B	chr12:74931701-74931702(+) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr12:74931713-74931714(+) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr12:74931787-74931788(+) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74931962-74931963(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr12:74932048-74932049(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932088-74932089(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932131-74932132(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932216-74932217(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr12:74932228-74932229(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr12:74932282-74932283(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr12:74932324-74932325(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr12:74932444-74932445(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr12:74932568-74932569(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932619-74932620(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932639-74932640(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932663-74932664(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932789-74932790(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932813-74932814(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932839-74932840(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932913-74932914(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932930-74932931(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74932974-74932975(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74933002-74933003(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74933155-74933156(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085 chr12:74933205-74933206(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74933277-74933278(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74933364-74933365(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74933372-74933373(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:74933484-74933485(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr12:74933552-74933553(+) m6A 3'UTR       24284625//26404942 chr12:74933784-74933785(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ATXN7L3B	Chromatin K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B4
Interactor2: ATXN7L3B

Evidence Support:

Prediction-Evidence	PITA//Targetscan
Support Database	VmiReg