Basic Information:

  VIRBase ID:  

VHID00527913

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:  MIMAT0012171          SLC25A35:  NM_001320871     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B4	SLC25A35
miRBase Accession/Entrez ID	MIMAT0012171	399512
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC25A35	chr17:8195595(-) A-I      intronic chr17:8191659(-) A-I      3'UTR chr17:8191489(-) A-I      3'UTR chr17:8191509(-) A-I      3'UTR chr17:8191690(-) A-I      3'UTR chr17:8195594(-) A-I      intronic chr17:8191676(-) A-I      3'UTR chr17:8191534(-) A-I      3'UTR chr17:8196967(-) A-I      intronic chr17:8195117(-) A-I      intronic chr17:8195417(-) A-I      intronic chr17:8195565(-) A-I      intronic chr17:8195554(-) A-I      intronic chr17:8191549(-) A-I      3'UTR chr17:8191677(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC25A35	chr17:8191422-8191423(-) m6A 3'UTR       24284625 chr17:8191538-8191539(-) m6A 3'UTR//exon       24284625//24981863 chr17:8191546-8191547(-) m6A 3'UTR//exon       24284625//24981863 chr17:8191680-8191681(-) m6A 3'UTR//exon       - chr17:8191931-8191932(-) m6A 3'UTR//intron       24981863 chr17:8192133-8192134(-) m6A 3'UTR//intron       24284625//24981863 chr17:8192545-8192546(-) m6A 3'UTR//intron       - chr17:8192619-8192620(-) m6A 3'UTR//intron       27371828 chr17:8192634-8192635(-) m6A 3'UTR//intron       27371828 chr17:8192647-8192648(-) m6A 3'UTR//intron       27371828 chr17:8192944-8192945(-) m6A 3'UTR//CDS       24284625 chr17:8193214-8193215(-) m6A 3'UTR//CDS       24284625//25456834//24981863//22608085 chr17:8193244-8193245(-) m6A CDS       24284625//25456834//24981863//22608085 chr17:8193444-8193445(-) m6A 3'UTR//intron       25456834//24981863//27773535//22608085 chr17:8193466-8193467(-) m6A 3'UTR//intron       24981863//27773535 chr17:8193484-8193485(-) m6A 3'UTR//intron       24981863//27773535 chr17:8193499-8193500(-) m6A 3'UTR//intron       27773535 chr17:8193628-8193629(-) m6A 3'UTR//intron       27773535 chr17:8193713-8193714(-) m6A 3'UTR//intron       27773535 chr17:8193832-8193833(-) m6A CDS//intron       24284625//24981863//27773535 chr17:8193859-8193860(-) m6A CDS//intron       24284625//24981863//27773535 chr17:8193947-8193948(-) m6A CDS//intron       24284625//27773535 chr17:8193956-8193957(-) m6A CDS//intron       24284625//27773535 chr17:8198029-8198030(-) m6A CDS       - chr17:8198052-8198053(-) m6A CDS       24981863 chr17:8198120-8198121(-) m6A CDS       24284625//24981863//27773535 chr17:8198215-8198216(-) m6A 5'UTR       24284625//24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC25A35	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B4
Interactor2: SLC25A35

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg