Detail Information

Basic Information:


  VIRBase ID:  

VHID00527828

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:           RBPMS2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B4 RBPMS2
miRBase
Accession/Entrez ID		 MIMAT0012171 348093
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RBPMS2
chr15:65036100(-) A-I      intronic
chr15:65036224(-) A-I      intronic
chr15:65036161(-) A-I      intronic
chr15:65037138(-) A-I      intronic
chr15:65037195(-) A-I      intronic
chr15:65037184(-) A-I      intronic
chr15:65037232(-) A-I      intronic
chr15:65037240(-) A-I      intronic
chr15:65037181(-) A-I      intronic
chr15:65037152(-) A-I      intronic
chr15:65036590(-) A-I      intronic
chr15:65037151(-) A-I      intronic
chr15:65036244(-) A-I      intronic
chr15:65037183(-) A-I      intronic
chr15:65037190(-) A-I      intronic
chr15:65057182(-) A-I      intronic
chr15:65050179(-) A-I      intronic
chr15:65059264(-) A-I      intronic
chr15:65034202(-) A-I      intronic
chr15:65037226(-) A-I      intronic
chr15:65046763(-) A-I      intronic
chr15:65037125(-) A-I      intronic
chr15:65037185(-) A-I      intronic
chr15:65036601(-) A-I      intronic
chr15:65034325(-) A-I      intronic
chr15:65036086(-) A-I      intronic
chr15:65034331(-) A-I      intronic
chr15:65036101(-) A-I      intronic
chr15:65057169(-) A-I      intronic
chr15:65057326(-) A-I      intronic
chr15:65063652(-) A-I      intronic
chr15:65033998(-) A-I      intronic
chr15:65036112(-) A-I      intronic
chr15:65057971(-) A-I      intronic
chr15:65060086(-) A-I      intronic
chr15:65052878(-) A-I      intronic
chr15:65034148(-) A-I      intronic
chr15:65037049(-) A-I      intronic
chr15:65037119(-) A-I      intronic
chr15:65036087(-) A-I      intronic
chr15:65048893(-) A-I      intronic
chr15:65061188(-) A-I      intronic
chr15:65061213(-) A-I      intronic
chr15:65057314(-) A-I      intronic
chr15:65036157(-) A-I      intronic
chr15:65036121(-) A-I      intronic
chr15:65043227(-) A-I      intronic
chr15:65052881(-) A-I      intronic
chr15:65034208(-) A-I      intronic
chr15:65052888(-) A-I      intronic
chr15:65034199(-) A-I      intronic
chr15:65034215(-) A-I      intronic
chr15:65053856(-) A-I      intronic
chr15:65037189(-) A-I      intronic
chr15:65036167(-) A-I      intronic
chr15:65037206(-) A-I      intronic
chr15:65036218(-) A-I      intronic
chr15:65049336(-) A-I      intronic
chr15:65054181(-) A-I      intronic
chr15:65036181(-) A-I      intronic
chr15:65048549(-) A-I      intronic
chr15:65034180(-) A-I      intronic
chr15:65052798(-) A-I      intronic
chr15:65054048(-) A-I      intronic
chr15:65053969(-) A-I      intronic
chr15:65036156(-) A-I      intronic
chr15:65043115(-) A-I      intronic
chr15:65036183(-) A-I      intronic
chr15:65036293(-) A-I      intronic
chr15:65037178(-) A-I      intronic
chr15:65054294(-) A-I      intronic
chr15:65036514(-) A-I      intronic
chr15:65049142(-) A-I      intronic
chr15:65048592(-) A-I      intronic
chr15:65043080(-) A-I      intronic
chr15:65059080(-) A-I      intronic
chr15:65037187(-) A-I      intronic
chr15:65036225(-) A-I      intronic
chr15:65036196(-) A-I      intronic
chr15:65037182(-) A-I      intronic
chr15:65036744(-) A-I      intronic
chr15:65037308(-) A-I      intronic
chr15:65034108(-) A-I      intronic
chr15:65036047(-) A-I      intronic
chr15:65036276(-) A-I      intronic
chr15:65053970(-) A-I      intronic
chr15:65034263(-) A-I      intronic
chr15:65048605(-) A-I      intronic
chr15:65059156(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RBPMS2
chr15:65032482-65032483(-) m6A 3'UTR       24981863//27773535
chr15:65032490-65032491(-) m6A 3'UTR       24981863//27773535
chr15:65032832-65032833(-) m6A 3'UTR       27773535
chr15:65032902-65032903(-) m6A 3'UTR       24284625//25456834//27773535
chr15:65032930-65032931(-) m6A 3'UTR       24284625//25456834//27773535
chr15:65032976-65032977(-) m6A 3'UTR       24284625//25456834//24981863//27773535
chr15:65033062-65033063(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828
chr15:65033090-65033091(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828
chr15:65033151-65033152(-) m6A 3'UTR       24284625//25456834//24981863//27773535
chr15:65041203-65041204(-) m6A CDS       24284625//27773535
chr15:65041318-65041319(-) m6A 5'UTR//CDS       27773535
chr15:65067690-65067691(-) m6A 5'UTR       24209618//25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RBPMS2
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B4
Interactor2: RBPMS2

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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