Basic Information:

  VIRBase ID:  

VHID00527680

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:  MIMAT0012171          EML3:  NM_001300793     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B4	EML3
miRBase Accession/Entrez ID	MIMAT0012171	256364
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ELP95//EMAP3//EMAP95

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EML3	chr11:62377546(-) A-I      intronic chr11:62377522(-) A-I      intronic chr11:62372029(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EML3	chr11:62369699-62369700(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//22608085 chr11:62369705-62369706(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//22608085 chr11:62369772-62369773(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr11:62369833-62369834(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr11:62369845-62369846(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr11:62369930-62369931(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536 chr11:62369984-62369985(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536 chr11:62370486-62370487(-) m6A exon//intron       - chr11:62370518-62370519(-) m6A exon//intron       - chr11:62370581-62370582(-) m6A exon//intron       - chr11:62370601-62370602(-) m6A exon//intron       - chr11:62370667-62370668(-) m6A 3'UTR//CDS//exon       - chr11:62372542-62372543(-) m6A exon//intron       27371828 chr11:62372567-62372568(-) m6A exon//intron       27371828 chr11:62373357-62373358(-) m6A 3'UTR//CDS//exon       - chr11:62373385-62373386(-) m6A 3'UTR//CDS//exon       - chr11:62375680-62375681(-) Gm 3'UTR//CDS       - chr11:62376061-62376062(-) m6A 3'UTR//CDS       24209618 chr11:62376076-62376077(-) m6A 3'UTR//CDS       24209618 chr11:62376095-62376096(-) m6A 3'UTR//CDS       24209618 chr11:62376237-62376238(-) m6A 3'UTR//CDS       24209618 chr11:62376445-62376446(-) m6A 3'UTR//CDS       24209618 chr11:62376465-62376466(-) m6A 3'UTR//CDS       24209618 chr11:62378655-62378656(-) m6A CDS       27773536 chr11:62378695-62378696(-) m6A CDS       27773536 chr11:62378716-62378717(-) m6A CDS       27773536 chr11:62378745-62378746(-) m6A CDS       27773536 chr11:62378797-62378798(-) m6A CDS       27773536 chr11:62378899-62378900(-) m6A CDS       27773536 chr11:62378997-62378998(-) m6A CDS       - chr11:62379441-62379442(-) m6A 5'UTR//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EML3	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B4
Interactor2: EML3

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg