Basic Information:

  VIRBase ID:  

VHID00527672

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:  MIMAT0012171          CBARP:  NM_001393918     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B4	CBARP
miRBase Accession/Entrez ID	MIMAT0012171	255057
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BARP//C19orf26//DOS

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CBARP	chr19:1228444-1228445(-) m6A 3'UTR       24209618 chr19:1228449-1228450(-) m6A 3'UTR       24209618 chr19:1228638-1228639(-) m6A 3'UTR       24209618//25456834//27371828 chr19:1228856-1228857(-) m6A 3'UTR       24284625//24209618//25456834//27371828 chr19:1228914-1228915(-) m6A 3'UTR       24284625//24209618//25456834//27371828 chr19:1229070-1229071(-) m6A 3'UTR       27371828 chr19:1229267-1229268(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27371828//27773536 chr19:1229295-1229296(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27371828//27773536 chr19:1229558-1229559(-) m6A 3'UTR//CDS       27371828 chr19:1229790-1229791(-) m6A 3'UTR//CDS       25456834//24981863//27371828//22575960 chr19:1229940-1229941(-) m6A 3'UTR//CDS       24209618//25456834//27371828//27773536//22575960 chr19:1230001-1230002(-) m6A 3'UTR//CDS       24209618//25456834//24981863//27371828//27773536 chr19:1230294-1230295(-) m6A 3'UTR//intron       24284625 chr19:1230743-1230744(-) m6A 3'UTR//intron       25456834 chr19:1230899-1230900(-) m6A CDS//intron       24284625//25456834//27371828 chr19:1230923-1230924(-) m6A CDS//intron       25456834//27371828 chr19:1230951-1230952(-) m6A CDS//intron       25456834//27371828 chr19:1230997-1230998(-) m6A CDS//intron       25456834//27371828 chr19:1231065-1231066(-) m6A CDS//intron       27371828 chr19:1231189-1231190(-) m6A 3'UTR//CDS       24284625//27371828 chr19:1233432-1233433(-) m6A 3'UTR//CDS       24284625//27371828 chr19:1234720-1234721(-) m6A 3'UTR//CDS       24284625 chr19:1235099-1235100(-) m6A 3'UTR//CDS       24284625 chr19:1235122-1235123(-) m6A 3'UTR//CDS       24284625 chr19:1235143-1235144(-) m6A 3'UTR//CDS       24284625 chr19:1235541-1235542(-) m6A 3'UTR//CDS       24284625 chr19:1235894-1235895(-) m6A CDS       24284625 chr19:1235906-1235907(-) m6A CDS       24284625 chr19:1236016-1236017(-) m6A CDS       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CBARP	Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B4
Interactor2: CBARP

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg