Basic Information:

  VIRBase ID:  

VHID00527518

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:  MIMAT0012171          ZFPM1:  NM_153813     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B4	ZFPM1
miRBase Accession/Entrez ID	MIMAT0012171	161882
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FOG//FOG1//ZC2HC11A//ZNF408//ZNF89A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZFPM1	chr16:88556667(+) A-I      intronic chr16:88595208(+) A-I      intronic chr16:88595185(+) A-I      intronic chr16:88581936(+) A-I      intronic chr16:88595487(+) A-I      intronic chr16:88593485(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZFPM1	chr16:88546187(+) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZFPM1	chr16:88520044-88520045(+) m6A 5'UTR//exon       - chr16:88520060-88520061(+) m6A CDS//exon       24284625 chr16:88552358-88552359(+) m6A CDS//exon       24284625 chr16:88555502-88555503(+) m6A CDS//exon//intron       24284625//24209618//27371828 chr16:88555508-88555509(+) m6A CDS//exon//intron       24284625//24209618//27371828 chr16:88555514-88555515(+) m6A CDS//exon//intron       24284625//24209618//27371828 chr16:88580895-88580896(+) m6A CDS       - chr16:88583002-88583003(+) m6A 3'UTR//CDS//intron       - chr16:88594485-88594486(+) m6A CDS       - chr16:88598430-88598431(+) m6A CDS       24284625 chr16:88598549-88598550(+) m6A CDS       24284625 chr16:88599235-88599236(+) m6A CDS       24209618 chr16:88599317-88599318(+) m6A CDS       24284625//24209618//24981863 chr16:88599615-88599616(+) m6A CDS       24284625//24209618//25456834//24981863//27371828 chr16:88599646-88599647(+) m6A CDS       24209618//25456834//24981863//27371828 chr16:88599651-88599652(+) m6A CDS       24209618//25456834//24981863//27371828 chr16:88600064-88600065(+) m6A CDS       24209618 chr16:88600454-88600455(+) m6A CDS       24209618//25456834//24981863 chr16:88600531-88600532(+) m6A CDS       24209618 chr16:88600968-88600969(+) m6A CDS       24209618//24981863 chr16:88601226-88601227(+) m6A CDS       24284625//24209618//25456834//24981863 chr16:88601240-88601241(+) m6A CDS       24284625//24209618//24981863//22575960 chr16:88601463-88601464(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:88601479-88601480(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:88601535-88601536(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZFPM1	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B4
Interactor2: ZFPM1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg