Detail Information

Basic Information:


  VIRBase ID:  

VHID00527047

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:           UNC119B:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B4 UNC119B
miRBase
Accession/Entrez ID
MIMAT0012171 84747
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - POC7B

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR UNC119B
chr12:121152813(+) A-I      intronic
chr12:121152833(+) A-I      intronic
chr12:121152836(+) A-I      intronic
chr12:121152879(+) A-I      intronic
chr12:121152249(+) A-I      intronic
chr12:121152203(+) A-I      intronic
chr12:121153596(+) A-I      intronic
chr12:121152883(+) A-I      intronic
chr12:121152298(+) A-I      intronic
chr12:121152397(+) A-I      intronic
chr12:121152735(+) A-I      intronic
chr12:121152793(+) A-I      intronic
chr12:121152796(+) A-I      intronic
chr12:121152395(+) A-I      intronic
chr12:121152989(+) A-I      intronic
chr12:121152204(+) A-I      intronic
chr12:121152736(+) A-I      intronic
chr12:121152806(+) A-I      intronic
chr12:121152321(+) A-I      intronic
chr12:121152265(+) A-I      intronic
chr12:121152914(+) A-I      intronic
chr12:121152398(+) A-I      intronic
chr12:121152847(+) A-I      intronic
chr12:121152887(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase UNC119B
chr12:121148358-121148359(+) m1A CDS//exon       26863196//26863410
chr12:121148383-121148384(+) m6A CDS//exon       24209618//25456834//24981863
chr12:121148473-121148474(+) m6A CDS//exon       24209618
chr12:121151089-121151090(+) m6A CDS//exon       -
chr12:121151097-121151098(+) m6A CDS//exon       -
chr12:121154469-121154470(+) m6A CDS       24981863
chr12:121154528-121154529(+) m6A CDS       24981863
chr12:121154692-121154693(+) m6A CDS       24981863
chr12:121154707-121154708(+) m6A CDS       24284625//24981863
chr12:121154741-121154742(+) m6A CDS       24284625//24981863
chr12:121154755-121154756(+) m6A CDS       24284625//24981863
chr12:121154797-121154798(+) m6A CDS       24284625//24981863
chr12:121154807-121154808(+) m6A CDS       24284625//24981863
chr12:121157751-121157752(+) m6A CDS       24284625//24981863
chr12:121158453-121158454(+) Y 3'UTR       26075521
chr12:121160707-121160708(+) m6A 3'UTR       24981863
chr12:121160779-121160780(+) m6A 3'UTR       24981863
chr12:121160843-121160844(+) m6A 3'UTR       24981863
chr12:121160887-121160888(+) m6A 3'UTR       24981863
chr12:121161120-121161121(+) m6A 3'UTR       24981863
chr12:121161152-121161153(+) m6A 3'UTR       24981863
chr12:121161210-121161211(+) m6A 3'UTR       24981863
chr12:121161283-121161284(+) m6A 3'UTR       24981863//27773535
chr12:121161371-121161372(+) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate UNC119B
Chromatin K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B4
Interactor2: UNC119B

Evidence Support:


Prediction-Evidence PITA//Targetscan
Support Database VmiReg

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