Basic Information:

  VIRBase ID:  

VHID00526038

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:  MIMAT0012171          DEXI:  NM_014015     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B4	DEXI
miRBase Accession/Entrez ID	MIMAT0012171	28955
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MYLE

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DEXI	chr16:11026749(-) A-I      intronic chr16:11026620(-) A-I      intronic chr16:11025636(-) A-I      intronic chr16:11025569(-) A-I      intronic chr16:11025061(-) A-I      intronic chr16:11025715(-) A-I      intronic chr16:11026669(-) A-I      intronic chr16:11025717(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DEXI	chr16:11024926(-) A-I intron -    22327324 chr16:11025445(-) A-I intron -    22327324 chr16:11025491(-) A-I intron -    22327324 chr16:11025549(-) A-I intron -    22327324 chr16:11025617(-) A-I intron -    22327324 chr16:11025637(-) A-I intron -    22327324 chr16:11026729(-) A-I intron -    22327324 chr16:11024926(-) T-C intron -    22484847 chr16:11024962(-) T-C intron -    22484847 chr16:11024972(-) T-C intron -    22484847 chr16:11025000(-) T-C intron -    22484847 chr16:11025017(-) T-C intron -    22484847 chr16:11025065(-) T-C intron -    22484847 chr16:11025071(-) T-C intron -    22484847 chr16:11025075(-) T-C intron -    22484847 chr16:11025439(-) T-C intron -    22484847 chr16:11025445(-) T-C intron -    22484847 chr16:11025446(-) T-C intron -    22484847 chr16:11025467(-) T-C intron -    22484847 chr16:11025491(-) T-C intron -    22484847 chr16:11025548(-) T-C intron -    22484847 chr16:11025549(-) T-C intron -    22484847 chr16:11025593(-) T-C intron -    22484847 chr16:11025617(-) T-C intron -    22484847 chr16:11025626(-) T-C intron -    22484847 chr16:11025633(-) T-C intron -    22484847 chr16:11025637(-) T-C intron -    22484847 chr16:11025654(-) T-C intron -    22484847 chr16:11025689(-) T-C intron -    22484847 chr16:11025723(-) T-C intron -    22484847 chr16:11026648(-) T-C intron -    22484847 chr16:11026662(-) T-C intron -    22484847 chr16:11026669(-) A-G intron -    22484847 chr16:11026674(-) T-C intron -    22484847 chr16:11026729(-) T-C intron -    22484847 chr16:11026743(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DEXI	chr16:11022811-11022812(-) m6A 3'UTR//exon       24284625//27773535//22608085 chr16:11022902-11022903(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr16:11023106-11023107(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:11023113-11023114(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:11023122-11023123(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:11023195-11023196(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:11023275-11023276(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:11023340-11023341(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//22608085 chr16:11023367-11023368(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//22608085 chr16:11027749-11027750(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828 chr16:11027785-11027786(-) m6A 3'UTR//intron       24284625//25456834//27371828 chr16:11027793-11027794(-) m6A 3'UTR//intron       24284625//25456834//27371828 chr16:11027840-11027841(-) m6A 3'UTR//intron       24284625//25456834 chr16:11027852-11027853(-) m6A 3'UTR//intron       24284625//25456834 chr16:11027858-11027859(-) m6A 3'UTR//intron       24284625//25456834 chr16:11032759-11032760(-) m6A intron       27773535 chr16:11032781-11032782(-) m6A intron       27773535 chr16:11032931-11032932(-) m6A intron       24284625//24209618 chr16:11033024-11033025(-) m6A intron       24284625//24209618//22608085 chr16:11033042-11033043(-) m6A intron       24284625//24209618//27773535//22608085 chr16:11033053-11033054(-) m6A intron       24284625//24209618//27773535//22608085 chr16:11033059-11033060(-) m6A intron       24284625//24209618//27773535//22608085 chr16:11033174-11033175(-) m6A intron       24284625//27773535//22608085 chr16:11033280-11033281(-) m6A intron       - chr16:11033329-11033330(-) m6A intron       - chr16:11035447-11035448(-) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr16:11035520-11035521(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr16:11035656-11035657(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:11035671-11035672(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:11035677-11035678(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:11035999-11036000(-) m6A 5'UTR       24209618//27371828//27773536 chr16:11036202-11036203(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr16:11036213-11036214(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr16:11036248-11036249(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DEXI	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B4
Interactor2: DEXI

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg