Basic Information:

  VIRBase ID:  

VHID00525505

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:  MIMAT0012171          ARPC5:  NM_001270439     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B4	ARPC5
miRBase Accession/Entrez ID	MIMAT0012171	10092
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARC16//dJ127C7.3//p16-Arc

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARPC5	chr1:183596201-183596202(-) m6A 3'UTR//exon//intron       26404942 chr1:183596206-183596207(-) m6A 3'UTR//exon//intron       26404942 chr1:183596230-183596231(-) m6A 3'UTR//exon//intron       26404942 chr1:183596607-183596608(-) m6A 3'UTR//exon//intron       24284625//24981863//26404942//27371828//22575960//22608085 chr1:183596613-183596614(-) m6A 3'UTR//exon//intron       24284625//24981863//26404942//27371828//22575960//22608085 chr1:183596674-183596675(-) m6A CDS//exon//intron       24284625//24981863//26404942//27371828//22575960//22608085 chr1:183599692-183599693(-) m6A CDS//exon       26404942 chr1:183599770-183599771(-) m6A CDS//exon       27773536//22575960 chr1:183599823-183599824(-) m6A exon//intron       27773536//22575960 chr1:183599840-183599841(-) m6A exon//intron       27773536 chr1:183599915-183599916(-) m6A exon//intron       - chr1:183599952-183599953(-) m6A exon//intron       27773535 chr1:183599961-183599962(-) m6A exon//intron       27773535 chr1:183600079-183600080(-) m6A exon//intron       27773535 chr1:183600118-183600119(-) m6A exon//intron       27773535 chr1:183602204-183602205(-) m6A exon//intron       24209618//25456834//24981863//27371828//27773536 chr1:183602250-183602251(-) m6A CDS//exon       24209618//25456834//24981863//27371828//27773536 chr1:183602283-183602284(-) m6A CDS//exon       24209618//25456834//24981863//27371828//27773536 chr1:183602351-183602352(-) m6A exon//intron       24209618//25456834//24981863//27371828//27773536 chr1:183602401-183602402(-) m6A exon//intron       24209618//25456834//24981863//27371828//27773536 chr1:183602428-183602429(-) m6A exon//intron       25456834//27773536 chr1:183603045-183603046(-) m6A exon//intron       24209618//25456834//24981863 chr1:183603053-183603054(-) m6A exon//intron       24209618//25456834//24981863 chr1:183603087-183603088(-) m6A exon//intron       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr1:183604666-183604667(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr1:183604711-183604712(-) m1A CDS       26863196//26863410 chr1:183604729-183604730(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr1:183604783-183604784(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ARPC5	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B4
Interactor2: ARPC5

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg