Basic Information:

  VIRBase ID:  

VHID00524542

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B4:  MIMAT0012171          KCNC1:  NM_001112741     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B4	KCNC1
miRBase Accession/Entrez ID	MIMAT0012171	3746
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EPM7//KV3.1//KV4//NGK2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KCNC1	chr11:17799420(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KCNC1	chr11:17756603-17756604(+) m6A 5'UTR       - chr11:17756617-17756618(+) m6A 5'UTR       - chr11:17756709-17756710(+) m6A 5'UTR       - chr11:17757295-17757296(+) m6A 5'UTR       24981863 chr11:17757326-17757327(+) m6A 5'UTR       24981863 chr11:17757356-17757357(+) m6A 5'UTR       24981863 chr11:17757754-17757755(+) m6A CDS       24981863//22608085 chr11:17757843-17757844(+) m6A CDS       24981863//22608085 chr11:17757907-17757908(+) m6A CDS       24981863//22608085 chr11:17757931-17757932(+) m6A CDS       24981863//22608085 chr11:17758093-17758094(+) m6A CDS       24981863//22608085 chr11:17793271-17793272(+) m6A CDS       24981863//22608085 chr11:17793299-17793300(+) m6A CDS       22608085 chr11:17793797-17793798(+) m6A CDS       24981863//22608085 chr11:17793854-17793855(+) m6A CDS       24981863//22608085 chr11:17793950-17793951(+) m6A CDS       24981863//22608085 chr11:17793993-17793994(+) m6A CDS       24981863//22608085 chr11:17794070-17794071(+) m6A CDS       24981863//22608085 chr11:17794152-17794153(+) m6A CDS//intron       24981863 chr11:17794341-17794342(+) m6A 3'UTR//intron       22608085 chr11:17794402-17794403(+) m6A 3'UTR//intron       22608085 chr11:17794429-17794430(+) m6A 3'UTR//intron       22608085 chr11:17794518-17794519(+) m6A 3'UTR//intron       22608085 chr11:17794991-17794992(+) m6A 3'UTR//intron       24981863 chr11:17798707-17798708(+) m6A 3'UTR//intron       - chr11:17798712-17798713(+) m6A 3'UTR//intron       - chr11:17798830-17798831(+) m6A 3'UTR//intron       22608085 chr11:17798844-17798845(+) m6A 3'UTR//intron       22608085 chr11:17798876-17798877(+) m6A 3'UTR//intron       22608085 chr11:17798925-17798926(+) m6A 3'UTR//intron       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KCNC1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B4
Interactor2: KCNC1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg