Basic Information:

  VIRBase ID:  

VHID00523157

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B2RC:  MIMAT0012170          WHAMM:  NM_001080435     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B2RC	WHAMM
miRBase Accession/Entrez ID	MIMAT0012170	123720
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	WHAMM1//WHDC1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	WHAMM	chr15:83493766(+) A-I      intronic chr15:83502666(+) A-I      3'UTR chr15:83502676(+) A-I      3'UTR chr15:83502656(+) A-I      3'UTR chr15:83493797(+) A-I      intronic chr15:83493779(+) A-I      intronic chr15:83493771(+) A-I      intronic chr15:83493707(+) A-I      intronic chr15:83493750(+) A-I      intronic chr15:83493683(+) A-I      intronic chr15:83493273(+) A-I      intronic chr15:83493452(+) A-I      intronic chr15:83493312(+) A-I      intronic chr15:83493638(+) A-I      intronic chr15:83493689(+) A-I      intronic chr15:83493770(+) A-I      intronic chr15:83493756(+) A-I      intronic chr15:83489536(+) A-I      intronic chr15:83492443(+) A-I      intronic chr15:83493492(+) A-I      intronic chr15:83493826(+) A-I      intronic chr15:83493003(+) A-I      intronic chr15:83492328(+) A-I      intronic chr15:83493418(+) A-I      intronic chr15:83493631(+) A-I      intronic chr15:83493693(+) A-I      intronic chr15:83488570(+) A-I      intronic chr15:83494405(+) A-I      intronic chr15:83493027(+) A-I      intronic chr15:83494419(+) A-I      intronic chr15:83493724(+) A-I      intronic chr15:83493010(+) A-I      intronic chr15:83492974(+) A-I      intronic chr15:83493798(+) A-I      intronic chr15:83491307(+) A-I      intronic chr15:83493694(+) A-I      intronic chr15:83493754(+) A-I      intronic chr15:83492966(+) A-I      intronic chr15:83493834(+) A-I      intronic chr15:83493039(+) A-I      intronic chr15:83493112(+) A-I      intronic chr15:83493654(+) A-I      intronic chr15:83496608(+) A-I      intronic chr15:83493802(+) A-I      intronic chr15:83493307(+) A-I      intronic chr15:83492366(+) A-I      intronic chr15:83492979(+) A-I      intronic chr15:83488709(+) A-I      intronic chr15:83482232(+) A-I      intronic chr15:83493457(+) A-I      intronic chr15:83491270(+) A-I      intronic chr15:83493786(+) A-I      intronic chr15:83493214(+) A-I      intronic chr15:83493708(+) A-I      intronic chr15:83493653(+) A-I      intronic chr15:83492411(+) A-I      intronic chr15:83489526(+) A-I      intronic chr15:83502980(+) A-I      3'UTR chr15:83502673(+) A-I      3'UTR chr15:83502818(+) A-I      3'UTR chr15:83502999(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	WHAMM	chr15:83493693(+) A-I intron -    22327324 chr15:83493631(+) A-I intron -    21960545 chr15:83493754(+) A-I intron -    21960545 chr15:83493756(+) A-I intron -    21960545 chr15:83493631(+) A-G intron -    22484847 chr15:83493693(+) A-G intron -    22484847 chr15:83493756(+) A-G intron -    22484847 chr15:83496653(+) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	WHAMM	chr15:83478403-83478404(+) m6A 5'UTR       24981863 chr15:83488229-83488230(+) m6A CDS//exon       - chr15:83491855-83491856(+) m6A CDS//exon       - chr15:83491900-83491901(+) m6A CDS//exon       - chr15:83491960-83491961(+) m6A CDS//exon       - chr15:83495509-83495510(+) m6A CDS//exon       24981863//27773535 chr15:83495568-83495569(+) m6A CDS       24981863 chr15:83499375-83499376(+) m6A CDS       24284625//24981863 chr15:83499391-83499392(+) m6A CDS       24284625//24981863 chr15:83499405-83499406(+) m6A CDS       24284625//24981863 chr15:83499485-83499486(+) m6A CDS       24284625//24981863 chr15:83499540-83499541(+) m6A CDS       24284625//24981863 chr15:83499590-83499591(+) m6A CDS       24284625//24981863 chr15:83502113-83502114(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr15:83502145-83502146(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr15:83502158-83502159(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr15:83502250-83502251(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr15:83502265-83502266(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr15:83502347-83502348(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr15:83502627-83502628(+) m6A 3'UTR       24209618 chr15:83503011-83503012(+) m6A 3'UTR       - chr15:83503124-83503125(+) m6A 3'UTR       24981863//22608085 chr15:83503183-83503184(+) m6A 3'UTR       25456834//24981863//22608085 chr15:83503301-83503302(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	WHAMM	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B2RC
Interactor2: WHAMM

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg